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LOC18774483 nuclear transcription factor Y subunit C-3 [ Prunus persica (peach) ]

Gene ID: 18774483, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18774483
Gene description
nuclear transcription factor Y subunit C-3
Locus tag
PRUPE_6G328500
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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Location:
chromosome: G6
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G6 NC_034014.1 (28759729..28762041, complement)

Chromosome G6 - NC_034014.1Genomic Context describing neighboring genes Neighboring gene putative pentatricopeptide repeat-containing protein At3g05240 Neighboring gene alpha-crystallin domain-containing protein 22.3 Neighboring gene cation/calcium exchanger 5 Neighboring gene uncharacterized LOC18775330

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034014.1 Chromosome G6 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear transcription factor Y subunit C-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034014.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    28759729..28762041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020567060.1 → XP_020422649.1  nuclear transcription factor Y subunit C-3

    UniProtKB/TrEMBL
    M5W0Q0
    Conserved Domains (1) summary
    COG5208
    Location:85 → 259
    HAP5; CCAAT-binding factor, subunit C [Transcription]

  2. XM_007205675.2 → XP_007205737.1  nuclear transcription factor Y subunit C-3

    See identical proteins and their annotated locations for XP_007205737.1

    UniProtKB/TrEMBL
    M5W0Q0
    Conserved Domains (1) summary
    COG5208
    Location:85 → 259
    HAP5; CCAAT-binding factor, subunit C [Transcription]
Nucleotide Protein Strain
Heading Accession and Version

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