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Pam peptidylglycine alpha-amidating monooxygenase [ Mus musculus (house mouse) ]

Gene ID: 18484, updated on 8-Feb-2025

Summary

Official Symbol
Pamprovided by MGI
Official Full Name
peptidylglycine alpha-amidating monooxygenaseprovided by MGI
Primary source
MGI:MGI:97475
See related
Ensembl:ENSMUSG00000026335 AllianceGenome:MGI:97475
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PHM
Summary
Predicted to enable several functions, including metal ion binding activity; peptidylamidoglycolate lyase activity; and peptidylglycine monooxygenase activity. Predicted to be involved in several processes, including fatty acid primary amide biosynthetic process; peptide amidation; and response to zinc ion. Predicted to be located in several cellular components, including perikaryon; secretory granule membrane; and trans-Golgi network. Predicted to be active in extracellular region. Is expressed in several structures, including alimentary system; central nervous system; forelimb bud; limb interdigital region; and sensory organ. Orthologous to human PAM (peptidylglycine alpha-amidating monooxygenase). [provided by Alliance of Genome Resources, Feb 2025]
Expression
Broad expression in heart adult (RPKM 108.5), adrenal adult (RPKM 50.3) and 22 other tissues See more
Orthologs
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Genomic context

See Pam in Genome Data Viewer
Location:
1 D; 1 47.76 cM
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (97748816..98023578, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (97821091..98095853, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E3293 Neighboring gene macrophage immunometabolism regulator Neighboring gene diphosphoinositol pentakisphosphate kinase 2 Neighboring gene STARR-seq mESC enhancer starr_01779 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:99666627-99666810 Neighboring gene gypsy retrotransposon integrase 1 Neighboring gene STARR-seq mESC enhancer starr_01781 Neighboring gene predicted gene, 31771 Neighboring gene basic transcription factor 3, pseudogene 1 Neighboring gene STARR-seq mESC enhancer starr_01782 Neighboring gene RIKEN cDNA B230216N24 gene Neighboring gene STARR-seq mESC enhancer starr_01784 Neighboring gene STARR-seq mESC enhancer starr_01785 Neighboring gene predicted gene, 24465 Neighboring gene predicted gene, 51640 Neighboring gene RIKEN cDNA 1810006J02 gene Neighboring gene STARR-positive B cell enhancer ABC_E3294 Neighboring gene STARR-seq mESC enhancer starr_01786 Neighboring gene predicted gene 29461

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 
  • Targeted (4)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 
enables calcium ion binding ISO
Inferred from Sequence Orthology
more info
 
enables calcium ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables copper ion binding ISO
Inferred from Sequence Orthology
more info
 
enables copper ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables peptidylamidoglycolate lyase activity ISO
Inferred from Sequence Orthology
more info
 
enables peptidylamidoglycolate lyase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables peptidylglycine monooxygenase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables peptidylglycine monooxygenase activity ISO
Inferred from Sequence Orthology
more info
 
enables peptidylglycine monooxygenase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables peptidylglycine monooxygenase activity TAS
Traceable Author Statement
more info
PubMed 
enables protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
enables zinc ion binding ISO
Inferred from Sequence Orthology
more info
 
enables zinc ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in fatty acid primary amide biosynthetic process ISO
Inferred from Sequence Orthology
more info
 
involved_in fatty acid primary amide biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in long-chain fatty acid metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in peptide amidation ISO
Inferred from Sequence Orthology
more info
 
involved_in peptide amidation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in peptide metabolic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within peptide metabolic process TAS
Traceable Author Statement
more info
PubMed 
involved_in regulation of actin cytoskeleton organization ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in response to pH ISO
Inferred from Sequence Orthology
more info
 
involved_in response to xenobiotic stimulus ISO
Inferred from Sequence Orthology
more info
 
involved_in response to zinc ion IEA
Inferred from Electronic Annotation
more info
 
involved_in response to zinc ion ISO
Inferred from Sequence Orthology
more info
 
involved_in toxin metabolic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
PubMed 
is_active_in extracellular region IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
located_in perikaryon ISO
Inferred from Sequence Orthology
more info
 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
PubMed 
located_in secretory granule ISO
Inferred from Sequence Orthology
more info
 
located_in secretory granule membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in trans-Golgi network ISO
Inferred from Sequence Orthology
more info
 
located_in transport vesicle membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
peptidyl-glycine alpha-amidating monooxygenase
Names
PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE PRECURSOR (PAM)
NP_001344056.1
NP_001407914.1
NP_001407915.1
NP_001407916.1
NP_001407917.1
NP_001407918.1
NP_001407919.1
NP_001407920.1
NP_001407921.1
NP_038654.2
XP_006529306.1
XP_011246239.1
XP_011246240.1
XP_011246241.1
XP_017174771.1
XP_017174773.1
XP_017174775.1
XP_030108022.1
XP_030108025.1
XP_030108027.1
XP_030108037.1
XP_030108045.1
XP_030108046.1
XP_030108047.1
XP_030108050.1
XP_036018665.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357127.2NP_001344056.1  peptidyl-glycine alpha-amidating monooxygenase isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC102191, AC157923
    Consensus CDS
    CCDS87863.1
    UniProtKB/Swiss-Prot
    E9QL07, P97467
    Related
    ENSMUSP00000057112.9, ENSMUST00000058762.15
    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  2. NM_001420985.1NP_001407914.1  peptidyl-glycine alpha-amidating monooxygenase isoform 3 precursor

    Status: VALIDATED

    Source sequence(s)
    AC102191, AC157923
  3. NM_001420986.1NP_001407915.1  peptidyl-glycine alpha-amidating monooxygenase isoform 4 precursor

    Status: VALIDATED

    Source sequence(s)
    AC102191, AC157923
    UniProtKB/TrEMBL
    E9Q704
    Related
    ENSMUSP00000125418.2, ENSMUST00000161567.8
  4. NM_001420987.1NP_001407916.1  peptidyl-glycine alpha-amidating monooxygenase isoform 5 precursor

    Status: VALIDATED

    Source sequence(s)
    AC102191, AC157923
  5. NM_001420988.1NP_001407917.1  peptidyl-glycine alpha-amidating monooxygenase isoform 6 precursor

    Status: VALIDATED

    Source sequence(s)
    AC102191, AC157923
  6. NM_001420989.1NP_001407918.1  peptidyl-glycine alpha-amidating monooxygenase isoform 7 precursor

    Status: VALIDATED

    Source sequence(s)
    AC102191, AC157923
  7. NM_001420990.1NP_001407919.1  peptidyl-glycine alpha-amidating monooxygenase isoform 8 precursor

    Status: VALIDATED

    Source sequence(s)
    AC102191, AC157923
  8. NM_001420991.1NP_001407920.1  peptidyl-glycine alpha-amidating monooxygenase isoform 9 precursor

    Status: VALIDATED

    Source sequence(s)
    AC102191, AC157923
  9. NM_001420992.1NP_001407921.1  peptidyl-glycine alpha-amidating monooxygenase isoform 10 precursor

    Status: VALIDATED

    Source sequence(s)
    AC102191, AC157923
    UniProtKB/TrEMBL
    F8VQA4
  10. NM_013626.4NP_038654.2  peptidyl-glycine alpha-amidating monooxygenase isoform 1 precursor

    See identical proteins and their annotated locations for NP_038654.2

    Status: VALIDATED

    Source sequence(s)
    AC102191, AC157923
    Consensus CDS
    CCDS48331.1
    UniProtKB/TrEMBL
    F8VQA4
    Related
    ENSMUSP00000095228.4, ENSMUST00000097625.10
    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:62172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    97748816..98023578 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030252190.1XP_030108050.1  peptidyl-glycine alpha-amidating monooxygenase isoform X13

    Conserved Domains (3) summary
    cd14958
    Location:397704
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  2. XM_030252187.1XP_030108047.1  peptidyl-glycine alpha-amidating monooxygenase isoform X12

    Conserved Domains (3) summary
    cd14958
    Location:397704
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  3. XM_030252186.1XP_030108046.1  peptidyl-glycine alpha-amidating monooxygenase isoform X11

    Conserved Domains (3) summary
    cd14958
    Location:397704
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  4. XM_030252185.1XP_030108045.1  peptidyl-glycine alpha-amidating monooxygenase isoform X10

    Conserved Domains (3) summary
    cd14958
    Location:397704
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  5. XM_006529243.4XP_006529306.1  peptidyl-glycine alpha-amidating monooxygenase isoform X1

    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  6. XM_036162772.1XP_036018665.1  peptidyl-glycine alpha-amidating monooxygenase isoform X1

    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  7. XM_030252162.2XP_030108022.1  peptidyl-glycine alpha-amidating monooxygenase isoform X1

    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  8. XM_030252165.2XP_030108025.1  peptidyl-glycine alpha-amidating monooxygenase isoform X1

    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  9. XM_011247939.4XP_011246241.1  peptidyl-glycine alpha-amidating monooxygenase isoform X7

    Conserved Domains (3) summary
    cd14958
    Location:397704
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  10. XM_017319286.3XP_017174775.1  peptidyl-glycine alpha-amidating monooxygenase isoform X5

    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  11. XM_011247938.4XP_011246240.1  peptidyl-glycine alpha-amidating monooxygenase isoform X4

    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  12. XM_011247937.4XP_011246239.1  peptidyl-glycine alpha-amidating monooxygenase isoform X2

    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  13. XM_017319284.3XP_017174773.1  peptidyl-glycine alpha-amidating monooxygenase isoform X3

    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  14. XM_030252167.1XP_030108027.1  peptidyl-glycine alpha-amidating monooxygenase isoform X1

    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  15. XM_030252177.1XP_030108037.1  peptidyl-glycine alpha-amidating monooxygenase isoform X7

    Conserved Domains (3) summary
    cd14958
    Location:397704
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain
  16. XM_017319282.2XP_017174771.1  peptidyl-glycine alpha-amidating monooxygenase isoform X1

    Conserved Domains (3) summary
    cd14958
    Location:503810
    NHL_PAL_like; Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL, EC 4.3.2.5)
    pfam01082
    Location:63172
    Cu2_monooxygen; Copper type II ascorbate-dependent monooxygenase, N-terminal domain
    pfam03712
    Location:200346
    Cu2_monoox_C; Copper type II ascorbate-dependent monooxygenase, C-terminal domain