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LOC18444520 serine decarboxylase 1 [ Amborella trichopoda ]

Gene ID: 18444520, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18444520
Gene description
serine decarboxylase 1
Locus tag
AMTR_s00030p00012550
Gene type
protein coding
RefSeq status
MODEL
Organism
Amborella trichopoda
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006499930.1 (12732..17770)

NW_006499930.1Genomic Context describing neighboring genes Neighboring gene abscisic acid 8'-hydroxylase 3 Neighboring gene transcription factor VIP1 Neighboring gene vacuolar iron transporter homolog 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006499930.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carboxy-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine decarboxylase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AMTR1.0 Primary Assembly

Genomic

  1. NW_006499930.1 Reference AMTR1.0 Primary Assembly

    Range
    12732..17770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006854458.3 → XP_006854520.1  serine decarboxylase 1

    See identical proteins and their annotated locations for XP_006854520.1

    UniProtKB/TrEMBL
    U5D3K0
    Conserved Domains (1) summary
    PLN02263
    Location:16 → 488
    PLN02263; serine decarboxylase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases