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ccpp-6 Cytosolic carboxypeptidase 6 [ Caenorhabditis elegans ]

Gene ID: 184043, updated on 5-Aug-2018

Summary

Gene symbol
ccpp-6
Gene description
Cytosolic carboxypeptidase 6
Primary source
WormBase:WBGene00017136
Locus tag
CELE_EEED8.6
Gene type
protein coding
RNA name
Cytosolic carboxypeptidase 6
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See ccpp-6 in Genome Data Viewer
Location:
chromosome: II
Exon count:
10
Sequence:
Chromosome: II; NC_003280.10 (5384204..5387317, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Protein kinase C-like 3 Neighboring gene Probable splicing factor, arginine/serine-rich 4 Neighboring gene Putative nudix hydrolase 6

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
metallocarboxypeptidase activity IDA
Inferred from Direct Assay
more info
PubMed 
metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 
metallocarboxypeptidase activity TAS
Traceable Author Statement
more info
PubMed 
metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
peptidase activity IEA
Inferred from Electronic Annotation
more info
 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
oviposition IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein deglutamylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
proteolysis IDA
Inferred from Direct Assay
more info
PubMed 
proteolysis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Cytosolic carboxypeptidase 6
NP_495012.2
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    5384204..5387317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062611.2NP_495012.2  Cytosolic carboxypeptidase 6 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495012.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q09296
    Conserved Domains (1) summary
    cd06908
    Location:153418
    M14_AGBL4_like; Peptidase M14-like domain of ATP/GTP binding protein AGBL-4 and related proteins
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