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Olfr5 olfactory receptor 5 [ Mus musculus (house mouse) ]

Gene ID: 18349, updated on 3-Oct-2020

Summary

Official Symbol
Olfr5provided by MGI
Official Full Name
olfactory receptor 5provided by MGI
Primary source
MGI:MGI:106685
See related
Ensembl:ENSMUSG00000096228
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MOR103; ORL120; MOR103-8
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Expression
Low expression observed in reference dataset See more

Genomic context

See Olfr5 in Genome Data Viewer
Location:
7; 7 A1
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (6483215..6490013, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (6480216..6487014, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (6432927..6433865, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene olfactory receptor 1336 Neighboring gene olfactory receptor 1346 Neighboring gene olfactory receptor 1347 Neighboring gene olfactory receptor 1348

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC123608

Gene Ontology Provided by MGI

Function Evidence Code Pubs
G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
olfactory receptor activity ISA
Inferred from Sequence Alignment
more info
PubMed 
Process Evidence Code Pubs
G protein-coupled receptor signaling pathway ISA
Inferred from Sequence Alignment
more info
PubMed 
response to stimulus IEA
Inferred from Electronic Annotation
more info
 
sensory perception of smell ISA
Inferred from Sequence Alignment
more info
PubMed 
signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane ISA
Inferred from Sequence Alignment
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
olfactory receptor 5
Names
GA_x6K02T2QGBW-3210997-3210059
odorant receptor M41
olfactory receptor 103-8

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_146914.2NP_667125.1  olfactory receptor 5

    See identical proteins and their annotated locations for NP_667125.1

    Status: VALIDATED

    Source sequence(s)
    AC188461
    Consensus CDS
    CCDS57479.1
    UniProtKB/Swiss-Prot
    Q60889
    UniProtKB/TrEMBL
    A0A1B0GRM6
    Related
    ENSMUSP00000083498.4, ENSMUST00000086318.4
    Conserved Domains (1) summary
    cd15224
    Location:30298
    7tmA_OR6B-like; olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    6483215..6490013 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011250453.3XP_011248755.1  olfactory receptor 5 isoform X1

    See identical proteins and their annotated locations for XP_011248755.1

    UniProtKB/Swiss-Prot
    Q60889
    UniProtKB/TrEMBL
    A0A1B0GRM6
    Related
    ENSMUSP00000147586.2, ENSMUST00000209866.3
    Conserved Domains (1) summary
    cd15224
    Location:30298
    7tmA_OR6B-like; olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors
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