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Or2c1 olfactory receptor family 2 subfamily C member 1 [ Mus musculus (house mouse) ]

Gene ID: 18312, updated on 9-Mar-2023

Summary

Official Symbol
Or2c1provided by MGI
Official Full Name
olfactory receptor family 2 subfamily C member 1provided by MGI
Primary source
MGI:MGI:106182
See related
Ensembl:ENSMUSG00000059043 AllianceGenome:MGI:106182
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
OR3; Olfr15; MOR256-17
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Orthologs
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Genomic context

See Or2c1 in Genome Data Viewer
Location:
16; 16 A1
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (3656839..3657777)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (3838975..3839913)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 36195 Neighboring gene predicted gene, 41409 Neighboring gene zinc finger protein 174 Neighboring gene zinc finger protein 597 Neighboring gene N(alpha)-acetyltransferase 60, NatF catalytic subunit Neighboring gene predicted gene, 41410

Genomic regions, transcripts, and products

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables odorant binding IDA
Inferred from Direct Assay
more info
PubMed 
enables olfactory receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables olfactory receptor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables olfactory receptor activity ISA
Inferred from Sequence Alignment
more info
PubMed 
Component Evidence Code Pubs
located_in cell cortex IDA
Inferred from Direct Assay
more info
PubMed 
located_in endoplasmic reticulum membrane TAS
Traceable Author Statement
more info
 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane ISA
Inferred from Sequence Alignment
more info
PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in plasma membrane TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
olfactory receptor 15
Names
GA_x54KRFPKG5P-348087-349025
odorant receptor OR3
olfactory receptor 256-17
olfactory receptor MOR256-17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008762.2NP_032788.2  olfactory receptor 15

    See identical proteins and their annotated locations for NP_032788.2

    Status: VALIDATED

    Source sequence(s)
    AC129021
    Consensus CDS
    CCDS27910.1
    UniProtKB/Swiss-Prot
    P23275, Q8VFF0
    Related
    ENSMUSP00000079720.2, ENSMUST00000080917.2
    Conserved Domains (2) summary
    pfam00001
    Location:41290
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:35305
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    3656839..3657777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)