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srt-58 Serpentine Receptor, class T [ Caenorhabditis elegans ]

Gene ID: 183034, updated on 12-Aug-2018

Summary

Gene symbol
srt-58
Gene description
Serpentine Receptor, class T
Primary source
WormBase:WBGene00016233
Locus tag
CELE_C29G2.5
Gene type
protein coding
RNA name
Serpentine Receptor, class T
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See srt-58 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (2574181..2575410)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Serpentine Receptor, class J Neighboring gene Serpentine Receptor, class J Neighboring gene pseudo Neighboring gene Serpentine Receptor, class T

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Serpentine Receptor, class T
NP_503705.3
  • Product from WormBase gene class srt;
    Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    2574181..2575410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071304.3NP_503705.3  Serpentine Receptor, class T [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    O16884
    Conserved Domains (1) summary
    smart00399
    Location:1283
    ZnF_C4; c4 zinc finger in nuclear hormone receptors
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