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CTHT_0062930 hypothetical protein [ Chaetomium thermophilum var. thermophilum DSM 1495 ]

Gene ID: 18260331, updated on 11-Apr-2024

Summary

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Gene symbol
CTHT_0062930
Gene description
hypothetical protein
Locus tag
CTHT_0062930
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Chaetomium thermophilum var. thermophilum DSM 1495 (strain: DSM 1495, variety: thermophilum, culture-collection: DSM:1495, type-material: type material of Chaetomium thermophilum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium
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Genomic context

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See CTHT_0062930 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_006383037.1Genomic Context describing neighboring genes Neighboring gene eliminates the production of nonsense-containing-like protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006383037.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Amlacher S, et al. Cell, 2011 Jul 22. PMID 21784248

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables branched-chain-amino-acid transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-leucine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in valine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006383037.1 Reference assembly

    Range
    1390059..1391366 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006696538.1 → XP_006696601.1  hypothetical protein CTHT_0062930 [Chaetomium thermophilum var. thermophilum DSM 1495]

    See identical proteins and their annotated locations for XP_006696601.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G0SE93
    Conserved Domains (2) summary
    PRK13357
    Location:75 → 412
    PRK13357; branched-chain amino acid aminotransferase; Provisional
    cd01557
    Location:104 → 401
    BCAT_beta_family; BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and ...
Nucleotide Protein
Heading Accession and Version

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