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CTHT_0054250 uncharacterized protein [ Thermochaetoides thermophila DSM 1495 ]

Gene ID: 18259463, updated on 6-Dec-2024
Gene symbol
CTHT_0054250
Gene description
uncharacterized protein
Locus tag
CTHT_0054250
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Thermochaetoides thermophila DSM 1495 (strain: DSM 1495, variety: thermophilum, culture-collection: DSM:1495, type-material: type material of Chaetomium thermophilum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermochaetoides
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Location:
chromosome: Unknown
Exon count:
1

NW_006383036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic Sequence:
NW_006383036.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Amlacher S, et al. Cell, 2011 Jul 22. PMID 21784248
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Pwp2p-containing subcomplex of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of small-subunit processome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
uncharacterized protein
XP_006695760.1
  • SMART: WD40 WD40 repeats

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006383036.1 Reference assembly

    Range
    1577432..1579288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006695697.1 → XP_006695760.1  uncharacterized protein CTHT_0054250 [Thermochaetoides thermophila DSM 1495]

    See identical proteins and their annotated locations for XP_006695760.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G0SBN9
    Conserved Domains (2) summary
    COG2319
    Location:230 → 618
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:331 → 365
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases