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CTHT_0026760 putative vacuolar protein sorting-associated protein [ Thermochaetoides thermophila DSM 1495 ]

Gene ID: 18256714, updated on 9-Jul-2025
Gene symbol
CTHT_0026760
Gene description
putative vacuolar protein sorting-associated protein
Locus tag
CTHT_0026760
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Thermochaetoides thermophila DSM 1495 (strain: DSM 1495, variety: thermophilum, culture-collection: DSM:1495, type-material: type material of Chaetomium thermophilum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Thermochaetoides
Orthologs
all
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See CTHT_0026760 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_006383032.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene mitochondrial processing peptidase alpha subunit-like protein

Genomic Sequence:
NW_006383032.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Amlacher S, et al. Cell, 2011 Jul 22. PMID 21784248
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuole fusion, non-autophagic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of HOPS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
putative vacuolar protein sorting-associated protein

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006383032.1 Reference assembly

    Range
    2173125..2175903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006693071.1 → XP_006693134.1  putative vacuolar protein sorting-associated protein [Thermochaetoides thermophila DSM 1495]

    See identical proteins and their annotated locations for XP_006693134.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G0S6M7
    Conserved Domains (4) summary
    COG2319
    Location:9 → 380
    WD40; WD40 repeat [General function prediction only]
    pfam04841
    Location:6 → 411
    Vps16_N; Vps16, N-terminal region
    pfam04840
    Location:504 → 794
    Vps16_C; Vps16, C-terminal region
    sd00039
    Location:91 → 126
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases