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CTHT_0006170 hypothetical protein [ Chaetomium thermophilum var. thermophilum DSM 1495 ]

Gene ID: 18254655, updated on 25-Jan-2024

Summary

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Gene symbol
CTHT_0006170
Gene description
hypothetical protein
Locus tag
CTHT_0006170
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Chaetomium thermophilum var. thermophilum DSM 1495 (strain: DSM 1495, variety: thermophilum, culture-collection: DSM:1495, type-material: type material of Chaetomium thermophilum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium
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Genomic context

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See CTHT_0006170 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_006383023.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene putative ubiquitin fusion degradation protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006383023.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Amlacher S, et al. Cell, 2011 Jul 22. PMID 21784248

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in box C/D snoRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of NuA4 histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of R2TP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Swr1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_006691150.1
  • SMART: AAA ATPases associated with a variety of cellular activities

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006383023.1 Reference assembly

    Range
    2193677..2195260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006691087.1 → XP_006691150.1  hypothetical protein CTHT_0006170 [Chaetomium thermophilum var. thermophilum DSM 1495]

    See identical proteins and their annotated locations for XP_006691150.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G0RYC2
    Conserved Domains (1) summary
    COG1224
    Location:11 → 450
    TIP49; DNA helicase TIP49, TBP-interacting protein [Transcription]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
6FHS_D.1
6FHS_E.1
6FHS_F.1
6FML_D.1
6FML_E.1
6FML_F.1

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