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sel-7 Suppressor/Enhancer of Lin-12 [ Caenorhabditis elegans ]

Gene ID: 181539, updated on 22-Feb-2019

Summary

Gene symbol
sel-7
Gene description
Suppressor/Enhancer of Lin-12
Primary source
WormBase:WBGene00004764
Locus tag
CELE_K04G11.2
Gene type
protein coding
RNA name
Suppressor/Enhancer of Lin-12
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See sel-7 in Genome Data Viewer
Location:
chromosome: X
Exon count:
7
Sequence:
Chromosome: X; NC_003284.9 (14333569..14340472, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Uncharacterized protein Neighboring gene WD repeat-containing protein wdr-5.2

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
lateral inhibition IGI
Inferred from Genetic Interaction
more info
PubMed 
negative regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of Notch signaling pathway IGI
Inferred from Genetic Interaction
more info
PubMed 
regulation of cell fate specification IGI
Inferred from Genetic Interaction
more info
PubMed 
regulation of development, heterochronic IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of mesodermal cell fate specification IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
nucleus IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Suppressor/Enhancer of Lin-12
NP_510392.2
  • Confirmed by transcript evidence;
    Product from WormBase gene class sel

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    14333569..14340472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077991.5NP_510392.2  Suppressor/Enhancer of Lin-12 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510392.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EGS7
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