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aakb-1 AMPKBI domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 181492, updated on 12-Feb-2021

Summary

Gene symbol
aakb-1
Gene description
AMPKBI domain-containing protein
Primary source
WormBase:WBGene00010115
Locus tag
CELE_F55F3.1
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

See aakb-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
4
Sequence:
Chromosome: X; NC_003284.9 (13755771..13758962)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene PIX (PAK (p21-activated kinase) Interacting eXchange factor) homolog Neighboring gene ncRNA Neighboring gene tRNA Neighboring gene Nuclear hormone receptor family member nhr-71 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Carboxylic ester hydrolase

General gene information

Markers

Homology

  • Homologs of the aakb-1 gene: The aakb-1 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, S.cerevisiae, A.thaliana, rice, and frog.
  • Orthologs

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
protein kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
regulation of primary metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleotide-activated protein kinase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
AMPKBI domain-containing protein
NP_001366890.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    13755771..13758962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001381137.2NP_001366890.1  AMPKBI domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (2) summary
    cd02859
    Location:58138
    E_set_AMPKbeta_like_N; N-terminal Early set domain, a glycogen binding domain, associated with the catalytic domain of AMP-activated protein kinase beta subunit
    pfam04739
    Location:202268
    AMPKBI; 5'-AMP-activated protein kinase beta subunit, interaction domain
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