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aakb-1 AMP-Activated Kinase Beta subunit [ Caenorhabditis elegans ]

Gene ID: 181492, updated on 9-Sep-2018

Summary

Gene symbol
aakb-1
Gene description
AMP-Activated Kinase Beta subunit
Primary source
WormBase:WBGene00010115
Locus tag
CELE_F55F3.1
Gene type
protein coding
RNA name
AMP-Activated Kinase Beta subunit
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See aakb-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
4
Sequence:
Chromosome: X; NC_003284.9 (13755835..13758722)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene PIX (PAK (p21-activated kinase) Interacting eXchange factor) homolog Neighboring gene ncRNA Neighboring gene tRNA Neighboring gene Nuclear hormone receptor family member nhr-71 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Carboxylic ester hydrolase

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
contributes_to AMP-activated protein kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
kinase activity IEA
Inferred from Electronic Annotation
more info
 
protein kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleotide-activated protein kinase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
AMP-Activated Kinase Beta subunit
NP_510298.1
  • Product from WormBase gene class aakb;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    13755835..13758722
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_077897.6NP_510298.1  AMP-Activated Kinase Beta subunit [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_510298.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9XUY2
    Conserved Domains (2) summary
    cd02859
    Location:58138
    E_set_AMPKbeta_like_N; N-terminal Early set domain, a glycogen binding domain, associated with the catalytic domain of AMP-activated protein kinase beta subunit
    smart01010
    Location:181269
    AMPKBI; 5'-AMP-activated protein kinase beta subunit, interation domain
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