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pkn-1 Protein Kinase N (PKN) homolog [ Caenorhabditis elegans ]

Gene ID: 181244, updated on 19-Oct-2019

Summary

Gene symbol
pkn-1
Gene description
Protein Kinase N (PKN) homolog
Primary source
WormBase:WBGene00009793
Locus tag
CELE_F46F6.2
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See pkn-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
10
Sequence:
Chromosome: X; NC_003284.9 (10397243..10402573)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Gustatory receptor family protein 3 Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene ncRNA

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
kinase activity IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
peptidyl-serine phosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
M band IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm HDA PubMed 
striated muscle dense body HDA PubMed 
striated muscle dense body IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Protein Kinase N (PKN) homolog
NP_001257102.1
  • Product from WormBase gene class pkn;
    Confirmed by transcript evidence
NP_001359730.1
  • Product from WormBase gene class pkn;
    Confirmed by transcript evidence
NP_001360641.1
  • Product from WormBase gene class pkn;
    Confirmed by transcript evidence
NP_001360642.1
  • Product from WormBase gene class pkn;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    10397243..10402573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001373470.1NP_001360642.1  Protein Kinase N (PKN) homolog [Caenorhabditis elegans]

    Status: REVIEWED

  2. NM_001373471.1NP_001359730.1  Protein Kinase N (PKN) homolog [Caenorhabditis elegans]

    Status: REVIEWED

  3. NM_001373472.1NP_001360641.1  Protein Kinase N (PKN) homolog [Caenorhabditis elegans]

    Status: REVIEWED

  4. NM_001270173.2NP_001257102.1  Protein Kinase N (PKN) homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001257102.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EFX2
    Conserved Domains (6) summary
    cd11622
    Location:69134
    HR1_PKN_1; First Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N
    cd11623
    Location:154220
    HR1_PKN_2; Second Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N
    smart00220
    Location:684943
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd05589
    Location:6841009
    STKc_PKN; Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N
    cl00087
    Location:225291
    HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases
    cl14603
    Location:408470
    C2; C2 domain
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