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LOC18103878 protein enabled homolog [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18103878, updated on 1-Jun-2019

Summary

Gene symbol
LOC18103878
Gene description
protein enabled homolog
Locus tag
POPTR_012G117500v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Genomic context

See LOC18103878 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Pop_tri_v3 (GCF_000002775.4) 12 NC_037296.1 (13821198..13823326, complement)

Chromosome 12 - NC_037296.1Genomic Context describing neighboring genes Neighboring gene protein ROOT HAIR DEFECTIVE 3 homolog 2 Neighboring gene 26S proteasome regulatory subunit 8 homolog B Neighboring gene protein ROOT HAIR DEFECTIVE 3 homolog 2-like Neighboring gene 40S ribosomal protein Sa-2 Neighboring gene ras-related protein RABF2a

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037296.1 Chromosome 12 Reference Pop_tri_v3 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pop_tri_v3 Primary Assembly

Genomic

  1. NC_037296.1 Reference Pop_tri_v3 Primary Assembly

    Range
    13821198..13823326 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024582294.1XP_024438062.1  protein enabled homolog isoform X1

    Conserved Domains (1) summary
    cl23759
    Location:1895
    GT1; myb-like, SANT family
  2. XM_024582295.1XP_024438063.1  protein enabled homolog isoform X3

    Conserved Domains (1) summary
    cl23759
    Location:1895
    GT1; myb-like, SANT family
  3. XM_006376923.2XP_006376985.1  protein enabled homolog isoform X2

    See identical proteins and their annotated locations for XP_006376985.1

    UniProtKB/TrEMBL
    U5FZS6
    Conserved Domains (1) summary
    pfam13837
    Location:1895
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
  4. XM_024582297.1XP_024438065.1  protein enabled homolog isoform X6

    Conserved Domains (1) summary
    cl23759
    Location:1895
    GT1; myb-like, SANT family
  5. XM_024582296.1XP_024438064.1  protein enabled homolog isoform X4

    Conserved Domains (1) summary
    cl23759
    Location:1895
    GT1; myb-like, SANT family
  6. XM_006376922.2XP_006376984.1  protein enabled homolog isoform X5

    See identical proteins and their annotated locations for XP_006376984.1

    UniProtKB/TrEMBL
    U5FXW2
    Conserved Domains (1) summary
    pfam13837
    Location:1895
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
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