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cat-1 hypothetical protein [ Caenorhabditis elegans ]

Gene ID: 180837, updated on 5-Sep-2019

Summary

Gene symbol
cat-1
Gene description
hypothetical protein
Primary source
WormBase:WBGene00000295
Locus tag
CELE_W01C8.6
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See cat-1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Sequence:
Chromosome: X; NC_003284.9 (5705719..5710625, complement)

Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA Neighboring gene tRNA Neighboring gene tRNA Neighboring gene ncRNA Neighboring gene CYtochrome P450 family Neighboring gene hypothetical protein

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
dopamine:sodium symporter activity IDA
Inferred from Direct Assay
more info
PubMed 
monoamine transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
monoamine transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
serotonin:sodium symporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
serotonin:sodium symporter activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
aminergic neurotransmitter loading into synaptic vesicle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
dopamine biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
dopamine metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
dopamine transport IDA
Inferred from Direct Assay
more info
PubMed 
dopamine uptake IEA
Inferred from Electronic Annotation
more info
 
feeding behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
monoamine transport IDA
Inferred from Direct Assay
more info
PubMed 
neurotransmitter transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
serotonin transport IDA
Inferred from Direct Assay
more info
PubMed 
serotonin uptake IEA
Inferred from Electronic Annotation
more info
 
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
synaptic vesicle IDA
Inferred from Direct Assay
more info
PubMed 
synaptic vesicle membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
terminal bouton IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
hypothetical protein
NP_001024936.1
  • Partially confirmed by transcript evidence
NP_001024937.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003284.9 Reference assembly

    Range
    5705719..5710625 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001029765.2NP_001024936.1  Uncharacterized protein CELE_W01C8.6 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024936.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9GNP0
    Conserved Domains (2) summary
    cd06174
    Location:160499
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:160450
    MFS_1; Major Facilitator Superfamily
  2. NM_001029766.3NP_001024937.1  Uncharacterized protein CELE_W01C8.6 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024937.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7Z1Q0
    Conserved Domains (2) summary
    cd06174
    Location:97436
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam07690
    Location:97387
    MFS_1; Major Facilitator Superfamily
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