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LOC18039571 probable polyamine oxidase 4 [ Citrus x clementina ]

Gene ID: 18039571, updated on 21-Dec-2023
Gene symbol
LOC18039571
Gene description
probable polyamine oxidase 4
Locus tag
CICLE_v10011567mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262139.1 (21353059..21358485, complement)

NW_006262139.1Genomic Context describing neighboring genes Neighboring gene microsomal glutathione S-transferase 3 Neighboring gene protein DJ-1 homolog D Neighboring gene probable acyl-activating enzyme 12, peroxisomal Neighboring gene SUPPRESSOR OF ABI3-5

Genomic Sequence:
NW_006262139 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyamine oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in polyamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
probable polyamine oxidase 4

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262139.1 Reference Citrus_clementina_v1.0

    Range
    21353059..21358485 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006430294.2 → XP_006430357.1  probable polyamine oxidase 4

    See identical proteins and their annotated locations for XP_006430357.1

    UniProtKB/TrEMBL
    V4SS93
    Conserved Domains (2) summary
    PLN02268
    Location:29 → 463
    PLN02268; probable polyamine oxidase
    pfam13450
    Location:33 → 100
    NAD_binding_8; NAD(P)-binding Rossmann-like domain
Nucleotide Protein
Heading Accession and Version

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