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LOC18035426 26S proteasome non-ATPase regulatory subunit 4 homolog [ Citrus x clementina ]

Gene ID: 18035426, updated on 21-Dec-2023
Gene symbol
LOC18035426
Gene description
26S proteasome non-ATPase regulatory subunit 4 homolog
Locus tag
CICLE_v10028565mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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See LOC18035426 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262022.1 (1107248..1111319, complement)

NW_006262022.1Genomic Context describing neighboring genes Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene actin-depolymerizing factor 5 Neighboring gene CTL-like protein DDB_G0288717 Neighboring gene protein HIGH ARSENIC CONTENT 1, mitochondrial-like

Genomic Sequence:
NW_006262022 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle, base subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
26S proteasome non-ATPase regulatory subunit 4 homolog

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262022.1 Reference Citrus_clementina_v1.0

    Range
    1107248..1111319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024179378.1 → XP_024035146.1  26S proteasome non-ATPase regulatory subunit 4 homolog isoform X2

    Conserved Domains (1) summary
    cd01452
    Location:1 → 188
    VWA_26S_proteasome_subunit; 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of ...

  2. XM_006422562.2 → XP_006422625.1  26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1

    See identical proteins and their annotated locations for XP_006422625.1

    UniProtKB/TrEMBL
    V4SAK5
    Conserved Domains (1) summary
    cd01452
    Location:1 → 188
    VWA_26S_proteasome_subunit; 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of ...

  3. XM_006422561.2 → XP_006422624.1  26S proteasome non-ATPase regulatory subunit 4 homolog isoform X3

    See identical proteins and their annotated locations for XP_006422624.1

    UniProtKB/TrEMBL
    V4U9B2
    Conserved Domains (1) summary
    cd01452
    Location:1 → 188
    VWA_26S_proteasome_subunit; 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of ...
Nucleotide Protein
Heading Accession and Version

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