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LOC18034050 branched-chain-amino-acid aminotransferase 6 [ Citrus x clementina ]

Gene ID: 18034050, updated on 21-Dec-2023
Gene symbol
LOC18034050
Gene description
branched-chain-amino-acid aminotransferase 6
Locus tag
CICLE_v10029938mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262022.1 (1557181..1561289, complement)

NW_006262022.1Genomic Context describing neighboring genes Neighboring gene pathogenesis-related protein 1 Neighboring gene protein trichome birefringence-like 13 Neighboring gene pathogenesis-related protein 1-like Neighboring gene pathogenesis-related protein PR-1 type

Genomic Sequence:
NW_006262022 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables branched-chain-amino-acid transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
branched-chain-amino-acid aminotransferase 6

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262022.1 Reference Citrus_clementina_v1.0

    Range
    1557181..1561289 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006422653.2 → XP_006422716.2  branched-chain-amino-acid aminotransferase 6

    UniProtKB/TrEMBL
    V4SG10
    Conserved Domains (1) summary
    cl25388
    Location:52 → 382
    PRK13357; branched-chain amino acid aminotransferase; Provisional
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases