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Nfe2l3 nuclear factor, erythroid derived 2, like 3 [ Mus musculus (house mouse) ]

Gene ID: 18025, updated on 17-Sep-2019

Summary

Official Symbol
Nfe2l3provided by MGI
Official Full Name
nuclear factor, erythroid derived 2, like 3provided by MGI
Primary source
MGI:MGI:1339958
See related
Ensembl:ENSMUSG00000029832
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Nrf3
Expression
Biased expression in bladder adult (RPKM 16.5), CNS E18 (RPKM 5.1) and 13 other tissues See more
Orthologs

Genomic context

See Nfe2l3 in Genome Data Viewer
Location:
6 B3; 6 24.84 cM
Exon count:
4
Annotation release Status Assembly Chr Location
108 current GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (51432669..51458772)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (51382669..51408767)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 32479 Neighboring gene predicted gene 6559 Neighboring gene heterogeneous nuclear ribonucleoprotein A2/B1 Neighboring gene chromobox 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
negative regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of transcription, DNA-templated IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
nuclear factor erythroid 2-related factor 3
Names
NF-E2-related factor 3
NFE2-related factor 3
nuclear factor erythroid 2-like 3

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_010903.2NP_035033.1  nuclear factor erythroid 2-related factor 3

    See identical proteins and their annotated locations for NP_035033.1

    Status: VALIDATED

    Source sequence(s)
    AC154011, AK133935, AV237858, CJ045939
    Consensus CDS
    CCDS20134.1
    UniProtKB/Swiss-Prot
    Q9WTM4
    UniProtKB/TrEMBL
    Q3UZC1
    Related
    ENSMUSP00000005103.5, ENSMUST00000005103.11
    Conserved Domains (1) summary
    cd14720
    Location:538605
    bZIP_NFE2-like; Basic leucine zipper (bZIP) domain of Nuclear Factor, Erythroid-derived 2 (NFE2) and similar proteins: a DNA-binding and dimerization domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p6 C57BL/6J

Genomic

  1. NC_000072.6 Reference GRCm38.p6 C57BL/6J

    Range
    51432669..51458772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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