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fat-5 Delta(9)-fatty-acid desaturase fat-5 [ Caenorhabditis elegans ]

Gene ID: 180162, updated on 10-Aug-2021

Summary

Gene symbol
fat-5
Gene description
Delta(9)-fatty-acid desaturase fat-5
Primary source
WormBase:WBGene00001397
Locus tag
CELE_W06D12.3
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

See fat-5 in Genome Data Viewer
Location:
chromosome: V
Exon count:
3
Sequence:
Chromosome: V; NC_003283.11 (17725004..17726818)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Seven TM Receptor Neighboring gene ncRNA Neighboring gene TWiK family of potassium channels Neighboring gene ZP domain-containing protein Neighboring gene tRNA Neighboring gene tRNA Neighboring gene tRNA

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in long-chain fatty acid biosynthetic process IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in multicellular organism development IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in unsaturated fatty acid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Delta(9)-fatty-acid desaturase fat-5
NP_507482.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    17725004..17726818
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075081.5NP_507482.1  Delta(9)-fatty-acid desaturase fat-5 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_507482.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    G5ED44
    Conserved Domains (1) summary
    cd03505
    Location:65305
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
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