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nrx-1 NeuReXin related [ Caenorhabditis elegans ]

Gene ID: 179503, updated on 6-Sep-2019

Summary

Gene symbol
nrx-1
Gene description
NeuReXin related
Primary source
WormBase:WBGene00007799
Locus tag
CELE_C29A12.4
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See nrx-1 in Genome Data Viewer
Location:
chromosome: V
Exon count:
31
Sequence:
Chromosome: V; NC_003283.11 (10825007..10846703)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene VWFA domain-containing protein Neighboring gene Suppressor of activated egl-4 protein 1 Neighboring gene ncRNA

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
negative regulation of receptor clustering IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
presynaptic active zone IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
NeuReXin related
NP_001122868.2
  • Product from WormBase gene class nrx;
    Confirmed by transcript evidence
NP_001256262.1
  • Product from WormBase gene class nrx;
    Confirmed by transcript evidence
NP_001256263.1
  • Product from WormBase gene class nrx;
    Confirmed by transcript evidence
NP_001256264.1
  • Product from WormBase gene class nrx;
    Confirmed by transcript evidence
NP_001256265.1
  • Product from WormBase gene class nrx;
    Confirmed by transcript evidence
NP_001256266.1
  • Product from WormBase gene class nrx;
    Confirmed by transcript evidence
NP_001256267.1
  • Product from WormBase gene class nrx;
    Partially confirmed by transcript evidence
NP_001256268.1
  • Product from WormBase gene class nrx;
    Confirmed by transcript evidence
NP_001256270.1
  • Product from WormBase gene class nrx;
    Partially confirmed by transcript evidence
NP_001263859.1
  • Product from WormBase gene class nrx;
    Partially confirmed by transcript evidence
NP_001263860.1
  • Product from WormBase gene class nrx;
    Partially confirmed by transcript evidence
NP_001294674.1
  • Product from WormBase gene class nrx;
    Confirmed by transcript evidence
NP_001359759.1
  • Product from WormBase gene class nrx;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    10825007..10846703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001373101.1NP_001359759.1  NeuReXin related [Caenorhabditis elegans]

    Status: REVIEWED

  2. NM_001276930.2NP_001263859.1  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263859.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    I2HAJ6
    Conserved Domains (3) summary
    cd00054
    Location:663698
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:477634
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam02210
    Location:11381274
    Laminin_G_2; Laminin G domain
  3. NM_001276931.2NP_001263860.1  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001263860.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    I2HAJ7
    Conserved Domains (3) summary
    cd00054
    Location:663698
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:477634
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam02210
    Location:11381274
    Laminin_G_2; Laminin G domain
  4. NM_001129396.3NP_001122868.2  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122868.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A7UQ09
    Conserved Domains (3) summary
    cd00054
    Location:654689
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:468625
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam02210
    Location:11291265
    Laminin_G_2; Laminin G domain
  5. NM_001269333.2NP_001256262.1  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256262.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18291
    Conserved Domains (3) summary
    cd00054
    Location:654689
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:468625
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam02210
    Location:11291265
    Laminin_G_2; Laminin G domain
  6. NM_001269334.2NP_001256263.1  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256263.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1B6S5
  7. NM_001269335.2NP_001256264.1  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256264.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1B6S6
  8. NM_001269339.2NP_001256268.1  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256268.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8DZ40
  9. NM_001269336.2NP_001256265.1  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256265.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E9P874
  10. NM_001269337.2NP_001256266.1  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256266.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2FLH5
  11. NM_001307745.2NP_001294674.1  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001294674.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    S6EZT1
  12. NM_001269338.1NP_001256267.1  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256267.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E9P875
  13. NM_001269341.2NP_001256270.1  NeuReXin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001256270.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    E1B6S7
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