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egl-46 C2H2-type domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 179058, updated on 19-Oct-2019

Summary

Gene symbol
egl-46
Gene description
C2H2-type domain-containing protein
Primary source
WormBase:WBGene00001210
Locus tag
CELE_K11G9.4
Gene type
protein coding
RNA name
C2H2-type domain-containing protein
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See egl-46 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (6679101..6681573, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Carboxylic ester hydrolase Neighboring gene Carboxylic ester hydrolase Neighboring gene Carboxylic ester hydrolase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from BioSystems

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
DNA-binding transcription factor activity, RNA polymerase II-specific ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
DNA-binding transcription repressor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
RNA polymerase II transcription factor binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
axon guidance IMP
Inferred from Mutant Phenotype
more info
PubMed 
cell fate commitment IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
neuroblast division IMP
Inferred from Mutant Phenotype
more info
PubMed 
neuron differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
neuron differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
neuron migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of exit from mitosis IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of cell cycle process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
transcriptional repressor complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
C2H2-type domain-containing protein
NP_504694.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    6679101..6681573 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072293.6NP_504694.1  C2H2-type domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504694.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EFY4
    Conserved Domains (2) summary
    sd00017
    Location:182204
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:208230
    zf-C2H2; Zinc finger, C2H2 type
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