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atf-8 BZIP domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178998, updated on 5-Sep-2019

Summary

Gene symbol
atf-8
Gene description
BZIP domain-containing protein
Primary source
WormBase:WBGene00017535
Locus tag
CELE_F17A9.3
Gene type
protein coding
RNA name
BZIP domain-containing protein
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See atf-8 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (6105607..6107530)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene ncRNA Neighboring gene CWF19-like protein 1 homolog Neighboring gene Oxidored_FMN domain-containing protein Neighboring gene Oxidored_FMN domain-containing protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
RNA polymerase II regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
BZIP domain-containing protein
NP_504576.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    6105607..6107530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072175.5NP_504576.1  BZIP domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504576.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O16213
    Conserved Domains (1) summary
    cd14695
    Location:115174
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
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