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abhd-5.2 Abhydrolase domain-containing protein abhd-5.2 [ Caenorhabditis elegans ]

Gene ID: 178877, updated on 6-Jul-2021

Summary

Gene symbol
abhd-5.2
Gene description
Abhydrolase domain-containing protein abhd-5.2
Primary source
WormBase:WBGene00016507
Locus tag
CELE_C37H5.3
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

See abhd-5.2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
6
Sequence:
Chromosome: V; NC_003283.11 (4844685..4847025)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Coexpressed With Polycystins Neighboring gene Coexpressed With Polycystins Neighboring gene Abhydrolase domain-containing protein abhd-5.1 Neighboring gene anNEXin family Neighboring gene Uncharacterized protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables carboxylic ester hydrolase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables lysophosphatidic acid acyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in lipid homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in phosphatidic acid biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in lipid droplet IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
Abhydrolase domain-containing protein abhd-5.2
NP_504297.1
  • Partially confirmed by transcript evidence
NP_872178.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    4844685..4847025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_071896.7NP_504297.1  Abhydrolase domain-containing protein abhd-5.2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504297.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    H2KZ86
    Conserved Domains (1) summary
    cl26327
    Location:68413
    Abhydrolase_1; alpha/beta hydrolase fold
  2. NM_182378.4NP_872178.1  Abhydrolase domain-containing protein abhd-5.2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_872178.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    H2KZ86
    Conserved Domains (2) summary
    pfam00561
    Location:76325
    Abhydrolase_1; alpha/beta hydrolase fold
    pfam12695
    Location:77179
    Abhydrolase_5; Alpha/beta hydrolase family
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