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magi-1 MAGI (Membrane Associated Guanylate kinase Inverted) homolog [ Caenorhabditis elegans ]

Gene ID: 178107, updated on 19-Oct-2019

Summary

Gene symbol
magi-1
Gene description
MAGI (Membrane Associated Guanylate kinase Inverted) homolog
Primary source
WormBase:WBGene00010444
Locus tag
CELE_K01A6.2
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See magi-1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
17
Sequence:
Chromosome: IV; NC_003282.8 (11715039..11729280)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
beta-catenin binding IPI
Inferred from Physical Interaction
more info
PubMed 
glutamate receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
kinase activity IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
habituation IMP
Inferred from Mutant Phenotype
more info
PubMed 
long-term memory IMP
Inferred from Mutant Phenotype
more info
PubMed 
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
regulation of protein localization IMP
Inferred from Mutant Phenotype
more info
PubMed 
signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
adherens junction IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
synapse IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
MAGI (Membrane Associated Guanylate kinase Inverted) homolog
NP_001255577.1
  • Product from WormBase gene class magi;
    Confirmed by transcript evidence
NP_001255578.1
  • Product from WormBase gene class magi;
    Partially confirmed by transcript evidence
NP_001255579.1
  • Product from WormBase gene class magi;
    Confirmed by transcript evidence
NP_001255581.1
  • Product from WormBase gene class magi;
    Confirmed by transcript evidence
NP_001359733.1
  • Product from WormBase gene class magi;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    11715039..11729280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001372927.1NP_001359733.1  MAGI (Membrane Associated Guanylate kinase Inverted) homolog [Caenorhabditis elegans]

    Status: REVIEWED

  2. NM_001268648.2NP_001255577.1  MAGI (Membrane Associated Guanylate kinase Inverted) homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255577.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C1P633
    Conserved Domains (5) summary
    smart00228
    Location:421510
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00201
    Location:263293
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd00992
    Location:9681049
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00397
    Location:294323
    WW; WW domain
    cl17190
    Location:180244
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
  3. NM_001268649.1NP_001255578.1  MAGI (Membrane Associated Guanylate kinase Inverted) homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255578.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C1P635
    Conserved Domains (5) summary
    smart00228
    Location:421510
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00201
    Location:263293
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd00992
    Location:717800
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00397
    Location:294323
    WW; WW domain
    cl17190
    Location:180244
    NK; Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates ...
  4. NM_001268650.2NP_001255579.1  MAGI (Membrane Associated Guanylate kinase Inverted) homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255579.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    C1P634
    Conserved Domains (4) summary
    smart00228
    Location:222311
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00201
    Location:6494
    WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
    cd00992
    Location:769850
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00397
    Location:95124
    WW; WW domain
  5. NM_001268652.2NP_001255581.1  MAGI (Membrane Associated Guanylate kinase Inverted) homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255581.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D3YT29
    Conserved Domains (2) summary
    smart00228
    Location:196285
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:743824
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
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