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rps-11 Ribosomal Protein, Small subunit [ Caenorhabditis elegans ]

Gene ID: 178083, updated on 5-Aug-2018

Summary

Gene symbol
rps-11
Gene description
Ribosomal Protein, Small subunit
Primary source
WormBase:WBGene00004480
Locus tag
CELE_F40F11.1
Gene type
protein coding
RNA name
Ribosomal Protein, Small subunit
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See rps-11 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (11602652..11603217)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Abnormal cell migration protein 38 Neighboring gene RAs-related GTP binding protein C homolog Neighboring gene hypothetical protein

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
determination of adult lifespan IMP
Inferred from Mutant Phenotype
more info
PubMed 
translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
intracellular IEA
Inferred from Electronic Annotation
more info
 
ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Ribosomal Protein, Small subunit
NP_502186.1
  • Product from WormBase gene class rps;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    11602652..11603217
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069785.5NP_502186.1  Ribosomal Protein, Small subunit [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502186.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20206
    Conserved Domains (3) summary
    PTZ00241
    Location:1155
    PTZ00241; 40S ribosomal protein S11; Provisional
    pfam00366
    Location:72141
    Ribosomal_S17; Ribosomal protein S17
    pfam16205
    Location:470
    Ribosomal_S17_N; Ribosomal_S17 N-terminal
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