rps-11 Ribosomal_S17_N domain-containing protein [Caenorhabditis elegans] - Gene

Summary

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Gene symbol: rps-11
Gene description: Ribosomal_S17_N domain-containing protein
Primary source: WormBase:WBGene00004480
Locus tag: CELE_F40F11.1
Gene type: protein coding
RNA name: Ribosomal_S17_N domain-containing protein
RefSeq status: REVIEWED
Organism: Caenorhabditis elegans (strain: Bristol N2)
Lineage: Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See rps-11 in Genome Data Viewer

Location:: chromosome: IV

Exon count:: 3

Sequence:: Chromosome: IV; NC_003282.8 (11602641..11603284)

Chromosome IV - NC_003282.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003282.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

F40F11.1 (e-PCR)
- UniSTS:316790

Homology

Homologs of the rps-11 gene: The rps-11 gene is conserved in human, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
Orthologs

Gene Ontology Provided by WormBase

Function	Evidence Code	Pubs
structural constituent of ribosome	IBA Inferred from Biological aspect of Ancestor more info	PubMed
structural constituent of ribosome	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
determination of adult lifespan	IMP Inferred from Mutant Phenotype more info	PubMed
translation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
cytosolic small ribosomal subunit	IBA Inferred from Biological aspect of Ancestor more info	PubMed
ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Ribosomal_S17_N domain-containing protein

NP_502186.1

Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003282.8 Reference assembly

Range

11602641..11603284

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_069785.7 → NP_502186.1 Ribosomal_S17_N domain-containing protein [Caenorhabditis elegans]

See identical proteins and their annotated locations for NP_502186.1

Status: REVIEWED

UniProtKB/TrEMBL

Q20206

Conserved Domains (1) summary

PTZ00241
Location:1 → 155

PTZ00241; 40S ribosomal protein S11; Provisional