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rps-11 Ribosomal_S17_N domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 178083, updated on 8-Nov-2020

Summary

Gene symbol
rps-11
Gene description
Ribosomal_S17_N domain-containing protein
Primary source
WormBase:WBGene00004480
Locus tag
CELE_F40F11.1
Gene type
protein coding
RNA name
Ribosomal_S17_N domain-containing protein
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

See rps-11 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
3
Sequence:
Chromosome: IV; NC_003282.8 (11602641..11603284)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Abnormal cell migration protein 38 Neighboring gene RAs-related GTP binding protein C homolog Neighboring gene hypothetical protein

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

  • Homologs of the rps-11 gene: The rps-11 gene is conserved in human, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
determination of adult lifespan IMP
Inferred from Mutant Phenotype
more info
PubMed 
translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Ribosomal_S17_N domain-containing protein
NP_502186.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    11602641..11603284
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_069785.7NP_502186.1  Ribosomal_S17_N domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_502186.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20206
    Conserved Domains (1) summary
    PTZ00241
    Location:1155
    PTZ00241; 40S ribosomal protein S11; Provisional
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