Format

Send to:

Choose Destination

cal-4 CALmodulin related genes [ Caenorhabditis elegans ]

Gene ID: 177945, updated on 6-Sep-2019

Summary

Gene symbol
cal-4
Gene description
CALmodulin related genes
Primary source
WormBase:WBGene00000288
Locus tag
CELE_T07G12.1
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See cal-4 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
7
Sequence:
Chromosome: IV; NC_003282.8 (10521406..10530598)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ncRNA

Pathways from BioSystems

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
calcium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
calcium-mediated signaling IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
CALmodulin related genes
NP_001255489.1
  • Confirmed by transcript evidence;
    Product from WormBase gene class cal
NP_001255491.1
  • Product from WormBase gene class cal;
    Confirmed by transcript evidence
NP_001359734.1
  • Confirmed by transcript evidence;
    Product from WormBase gene class cal

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    10521406..10530598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001372924.1NP_001359734.1  CALmodulin related genes [Caenorhabditis elegans]

    Status: REVIEWED

  2. NM_001268560.2NP_001255489.1  CALmodulin related genes [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255489.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EDZ8
    Conserved Domains (2) summary
    PTZ00184
    Location:68211
    PTZ00184; calmodulin; Provisional
    cd00051
    Location:151212
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
  3. NM_001268562.2NP_001255491.1  CALmodulin related genes [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255491.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O18058
    Conserved Domains (2) summary
    PTZ00184
    Location:14157
    PTZ00184; calmodulin; Provisional
    cd00051
    Location:97158
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Support Center