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uba-1 UBA_e1_C domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 177855, updated on 8-Nov-2020

Summary

Gene symbol
uba-1
Gene description
UBA_e1_C domain-containing protein
Primary source
WormBase:WBGene00006699
Locus tag
CELE_C47E12.5
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See uba-1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
8
Sequence:
Chromosome: IV; NC_003282.8 (9989668..9994947, complement)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene MAM domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Inorganic pyrophosphatase 1 Neighboring gene alpha-1,2-Mannosidase

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

  • Homologs of the uba-1 gene: The uba-1 gene is conserved in human, Rhesus monkey, dog, cow, mouse, rat, zebrafish, fruit fly, mosquito, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, and rice.
  • Orthologs

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
ligase activity IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
ubiquitin activating enzyme activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ubiquitin-like modifier activating enzyme activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
cellular protein modification process IEA
Inferred from Electronic Annotation
more info
 
cellular response to DNA damage stimulus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
embryo development ending in birth or egg hatching IMP
Inferred from Mutant Phenotype
more info
PubMed 
nematode larval development IMP
Inferred from Mutant Phenotype
more info
PubMed 
nematode male tail tip morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
neuromuscular process IMP
Inferred from Mutant Phenotype
more info
PubMed 
oogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein modification by small protein conjugation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein ubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein ubiquitination IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of phosphorylation of RNA polymerase II C-terminal domain IMP
Inferred from Mutant Phenotype
more info
PubMed 
spermatogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
ubiquitin-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus HDA PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
UBA_e1_C domain-containing protein
NP_001033404.1
  • Confirmed by transcript evidence
NP_001367213.1
  • Confirmed by transcript evidence
NP_001370211.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    9989668..9994947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001383176.1NP_001370211.1  UBA_e1_C domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (1) summary
    TIGR01408
    Location:181026
    Ube1; ubiquitin-activating enzyme E1
  2. NM_001038315.8NP_001033404.1  UBA_e1_C domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001033404.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q27481
    Conserved Domains (1) summary
    TIGR01408
    Location:1031111
    Ube1; ubiquitin-activating enzyme E1
  3. NM_001380424.1NP_001367213.1  UBA_e1_C domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (1) summary
    TIGR01408
    Location:1021110
    Ube1; ubiquitin-activating enzyme E1
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