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daf-1 Cell surface receptor daf-1 [ Caenorhabditis elegans ]

Gene ID: 176829, updated on 10-Oct-2019

Summary

Gene symbol
daf-1
Gene description
Cell surface receptor daf-1
Primary source
WormBase:WBGene00000897
Locus tag
CELE_F29C4.1
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See daf-1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
9
Sequence:
Chromosome: IV; NC_003282.8 (132416..138084)

Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene COX6C domain-containing protein Neighboring gene Putative cuticle collagen 99 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene tRNA

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
SMAD binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
kinase activity IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transforming growth factor beta receptor activity, type I IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
transforming growth factor beta-activated receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
transmembrane receptor protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
BMP signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cellular response to growth factor stimulus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
dauer entry IGI
Inferred from Genetic Interaction
more info
PubMed 
dauer larval development IGI
Inferred from Genetic Interaction
more info
PubMed 
dauer larval development IMP
Inferred from Mutant Phenotype
more info
PubMed 
defense response to Gram-negative bacterium IMP
Inferred from Mutant Phenotype
more info
PubMed 
detection of bacterium IMP
Inferred from Mutant Phenotype
more info
PubMed 
determination of adult lifespan IMP
Inferred from Mutant Phenotype
more info
PubMed 
dorsal/ventral pattern formation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
larval feeding behavior IGI
Inferred from Genetic Interaction
more info
PubMed 
larval feeding behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
negative regulation of dauer larval development IMP
Inferred from Mutant Phenotype
more info
PubMed 
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein phosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
regulation of dauer larval development IGI
Inferred from Genetic Interaction
more info
PubMed 
regulation of dauer larval development IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of eating behavior IGI
Inferred from Genetic Interaction
more info
PubMed 
regulation of eating behavior IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of pharyngeal pumping IMP
Inferred from Mutant Phenotype
more info
PubMed 
transforming growth factor beta receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
transmembrane receptor protein serine/threonine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
receptor complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
Cell surface receptor daf-1
NP_001023159.1
  • Confirmed by transcript evidence
NP_001023160.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003282.8 Reference assembly

    Range
    132416..138084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001027988.5NP_001023159.1  Cell surface receptor daf-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001023159.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20792
    Conserved Domains (3) summary
    smart00467
    Location:265293
    GS; GS motif
    cd14056
    Location:297589
    STKc_TGFbR_I; Catalytic domain of the Serine/Threonine Kinases, Transforming Growth Factor beta family Type I Receptors
    pfam07714
    Location:293576
    Pkinase_Tyr; Protein tyrosine kinase
  2. NM_001027989.4NP_001023160.1  Cell surface receptor daf-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001023160.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20792
    Conserved Domains (3) summary
    smart00467
    Location:265293
    GS; GS motif
    pfam07714
    Location:293575
    Pkinase_Tyr; Protein tyrosine kinase
    cl21453
    Location:297588
    PKc_like; Protein Kinases, catalytic domain
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