Format

Send to:

Choose Destination

obr-1 Oxysterol-binding protein [ Caenorhabditis elegans ]

Gene ID: 176555, updated on 6-Jun-2018

Summary

Gene symbol
obr-1
Gene description
Oxysterol-binding protein
Primary source
WormBase:WBGene00012930
Locus tag
CELE_Y47D3A.17
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See obr-1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
17
Sequence:
Chromosome: III; NC_003281.10 (11257505..11270849, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S6 kinase beta Neighboring gene hypothetical protein Neighboring gene ncRNA Neighboring gene hypothetical protein

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
lipid binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
sterol binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
sterol transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
lipid transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
perinuclear endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
Oxysterol-binding protein
NP_001122729.1
  • Partially confirmed by transcript evidence
NP_001122730.1
  • Confirmed by transcript evidence
NP_001255117.1
  • Confirmed by transcript evidence
NP_499448.1
  • Confirmed by transcript evidence
NP_499449.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    11257505..11270849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067047.4NP_499448.1  Oxysterol-binding protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499448.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9U2C7
    Conserved Domains (3) summary
    pfam00169
    Location:61150
    PH; PH domain
    pfam01237
    Location:382746
    Oxysterol_BP; Oxysterol-binding protein
    cl17171
    Location:63162
    PH-like; Pleckstrin homology-like domain
  2. NM_001268188.1NP_001255117.1  Oxysterol-binding protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001255117.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G2HK04
    Conserved Domains (3) summary
    pfam00169
    Location:27116
    PH; PH domain
    pfam01237
    Location:348712
    Oxysterol_BP; Oxysterol-binding protein
    cl17171
    Location:29128
    PH-like; Pleckstrin homology-like domain
  3. NM_001129257.1NP_001122729.1  Oxysterol-binding protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122729.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A7DTF2
    Conserved Domains (2) summary
    pfam01237
    Location:458822
    Oxysterol_BP; Oxysterol-binding protein
    cl17171
    Location:170238
    PH-like; Pleckstrin homology-like domain
  4. NM_067048.4NP_499449.1  Oxysterol-binding protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499449.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q95Q23
    Conserved Domains (1) summary
    pfam01237
    Location:243607
    Oxysterol_BP; Oxysterol-binding protein
  5. NM_001129258.3NP_001122730.1  Oxysterol-binding protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122730.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A7DTF3
    Conserved Domains (1) summary
    pfam01237
    Location:65429
    Oxysterol_BP; Oxysterol-binding protein
Support Center