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aakb-2 AMP-Activated Kinase Beta subunit [ Caenorhabditis elegans ]

Gene ID: 176552, updated on 9-Sep-2018

Summary

Gene symbol
aakb-2
Gene description
AMP-Activated Kinase Beta subunit
Primary source
WormBase:WBGene00012928
Locus tag
CELE_Y47D3A.15
Gene type
protein coding
RNA name
AMP-Activated Kinase Beta subunit
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See aakb-2 in Genome Data Viewer
Location:
chromosome: III
Exon count:
3
Sequence:
Chromosome: III; NC_003281.10 (11237151..11238087)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ncRNA Neighboring gene Ribosomal protein S6 kinase beta

Pathways from BioSystems

General gene information

Homology

  • Homologs of the aakb-2 gene: The aakb-2 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, S.cerevisiae, A.thaliana, rice, and frog.
  • Orthologs

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
contributes_to AMP-activated protein kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
kinase activity IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleotide-activated protein kinase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
AMP-Activated Kinase Beta subunit
NP_499446.1
  • Product from WormBase gene class aakb;
    Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    11237151..11238087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_067045.1NP_499446.1  AMP-Activated Kinase Beta subunit [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499446.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9NAH7
    Conserved Domains (2) summary
    smart01010
    Location:190274
    AMPKBI; 5'-AMP-activated protein kinase beta subunit, interation domain
    pfam16561
    Location:62148
    AMPK1_CBM; Glycogen recognition site of AMP-activated protein kinase
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