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unc-47 Vesicular GABA transporter [ Caenorhabditis elegans ]

Gene ID: 176431, updated on 5-Sep-2019

Summary

Gene symbol
unc-47
Gene description
Vesicular GABA transporter
Primary source
WormBase:WBGene00006783
Locus tag
CELE_T20G5.6
Gene type
protein coding
RNA name
Vesicular GABA transporter
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See unc-47 in Genome Data Viewer
Location:
chromosome: III
Exon count:
7
Sequence:
Chromosome: III; NC_003281.10 (10183757..10186260, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Transmembrane cell adhesion receptor mua-3 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Rap guanine nucleotide exchange factor 1

Pathways from BioSystems

General gene information

Markers

Homology

  • Homologs of the unc-47 gene: The unc-47 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, A.thaliana, and frog.
  • Orthologs

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
amino acid transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
gamma-aminobutyric acid:proton symporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
amino acid transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
gamma-aminobutyric acid transport IEA
Inferred from Electronic Annotation
more info
 
neurotransmitter loading into synaptic vesicle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
cytoplasmic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 
dendrite terminus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of synaptic vesicle membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
neuron projection terminus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
synaptic vesicle IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Vesicular GABA transporter
NP_499255.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    10183757..10186260 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066854.6NP_499255.1  Vesicular GABA transporter [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499255.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34579
    Conserved Domains (2) summary
    COG0814
    Location:90471
    SdaC; Amino acid permease [Amino acid transport and metabolism]
    pfam01490
    Location:88475
    Aa_trans; Transmembrane amino acid transporter protein
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