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hcp-3 Histone H3-like centromeric protein hcp-3 [ Caenorhabditis elegans ]

Gene ID: 176359, updated on 10-Aug-2021

Summary

Gene symbol
hcp-3
Gene description
Histone H3-like centromeric protein hcp-3
Primary source
WormBase:WBGene00001831
Locus tag
CELE_F58A4.3
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

See hcp-3 in Genome Data Viewer
Location:
chromosome: III
Exon count:
4
Sequence:
Chromosome: III; NC_003281.10 (9615306..9616470, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Bardet-Biedl syndrome 4 protein homolog Neighboring gene DNA primase small subunit Neighboring gene Uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Helix-loop-helix protein 11 Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in chromosome IDA
Inferred from Direct Assay
more info
PubMed 
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 
located_in chromosome, centromeric region IDA
Inferred from Direct Assay
more info
PubMed 
located_in chromosome, centromeric region IEA
Inferred from Electronic Annotation
more info
 
located_in condensed chromosome, centromeric region IDA
Inferred from Direct Assay
more info
PubMed 
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
 
located_in kinetochore IMP
Inferred from Mutant Phenotype
more info
PubMed 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Histone H3-like centromeric protein hcp-3
NP_499128.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    9615306..9616470 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_066727.7NP_499128.1  Histone H3-like centromeric protein hcp-3 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_499128.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P34470
    Conserved Domains (2) summary
    smart00428
    Location:183288
    H3; Histone H3
    pfam00125
    Location:156284
    Histone; Core histone H2A/H2B/H3/H4
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