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pdfr-1 Calcitonin receptor-like protein 1 [ Caenorhabditis elegans ]

Gene ID: 175942, updated on 6-Sep-2019

Summary

Gene symbol
pdfr-1
Gene description
Calcitonin receptor-like protein 1
Primary source
WormBase:WBGene00015735
Locus tag
CELE_C13B9.4
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See pdfr-1 in Genome Data Viewer
Location:
chromosome: III
Exon count:
16
Sequence:
Chromosome: III; NC_003281.10 (6632837..6651025, complement)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Adrift-type SAM-dependent 2'-O-MTase domain-containing protein Neighboring gene hypothetical protein Neighboring gene Probable coatomer subunit delta Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene hypothetical protein

Bibliography

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
calcitonin receptor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
adenylate cyclase-activating G protein-coupled receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
cellular calcium ion homeostasis ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
positive regulation of adenylate cyclase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Calcitonin receptor-like protein 1
NP_001021170.1
  • Confirmed by transcript evidence
NP_001021171.1
  • Confirmed by transcript evidence
NP_001021172.1
  • Confirmed by transcript evidence
NP_001293621.1
  • Confirmed by transcript evidence
NP_001360187.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    6632837..6651025 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001026001.3NP_001021172.1  Calcitonin receptor-like protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021172.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q09460
    Conserved Domains (2) summary
    pfam00002
    Location:164425
    7tm_2; 7 transmembrane receptor (Secretin family)
    pfam02793
    Location:74143
    HRM; Hormone receptor domain
  2. NM_001025999.3NP_001021170.1  Calcitonin receptor-like protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021170.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q09460
    Conserved Domains (2) summary
    pfam00002
    Location:164425
    7tm_2; 7 transmembrane receptor (Secretin family)
    pfam02793
    Location:74143
    HRM; Hormone receptor domain
  3. NM_001026000.3NP_001021171.1  Calcitonin receptor-like protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021171.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q09460
    Conserved Domains (2) summary
    smart00008
    Location:70148
    HormR; Domain present in hormone receptors
    pfam00002
    Location:154415
    7tm_2; 7 transmembrane receptor (Secretin family)
  4. NM_001372610.1NP_001360187.1  Calcitonin receptor-like protein 1 [Caenorhabditis elegans]

    Status: REVIEWED

  5. NM_001306692.2NP_001293621.1  Calcitonin receptor-like protein 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001293621.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    S6FD44
    Conserved Domains (2) summary
    smart00008
    Location:70148
    HormR; Domain present in hormone receptors
    pfam00002
    Location:154415
    7tm_2; 7 transmembrane receptor (Secretin family)
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