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ppm-2 Probable protein phosphatase 2C T23F11.1 [ Caenorhabditis elegans ]

Gene ID: 175610, updated on 10-Oct-2019

Summary

Gene symbol
ppm-2
Gene description
Probable protein phosphatase 2C T23F11.1
Primary source
WormBase:WBGene00011953
Locus tag
CELE_T23F11.1
Gene type
protein coding
RNA name
Probable protein phosphatase 2C T23F11.1
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See ppm-2 in Genome Data Viewer
Location:
chromosome: III
Exon count:
9
Sequence:
Chromosome: III; NC_003281.10 (4648591..4653929)

Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene Prion-like-(Q/N-rich)-domain-bearing protein Neighboring gene DB domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene ncRNA

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
catalytic activity IEA
Inferred from Electronic Annotation
more info
 
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
magnesium-dependent protein serine/threonine phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
phosphoprotein phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
protein serine/threonine phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ubiquitin protein ligase binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
inactivation of MAPK activity IEA
Inferred from Electronic Annotation
more info
 
negative regulation of axon extension IGI
Inferred from Genetic Interaction
more info
PubMed 
negative regulation of axon extension IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of synapse assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
presynaptic active zone IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Probable protein phosphatase 2C T23F11.1
NP_497949.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003281.10 Reference assembly

    Range
    4648591..4653929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_065548.6NP_497949.1  Probable protein phosphatase 2C T23F11.1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_497949.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P49596
    Conserved Domains (1) summary
    cd00143
    Location:22286
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
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