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daf-22 Non-specific lipid-transfer protein-like 2 [ Caenorhabditis elegans ]

Gene ID: 174881, updated on 10-Apr-2019

Summary

Gene symbol
daf-22
Gene description
Non-specific lipid-transfer protein-like 2
Primary source
WormBase:WBGene00013284
Locus tag
CELE_Y57A10C.6
Gene type
protein coding
RNA name
Non-specific lipid-transfer protein-like 2
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See daf-22 in Genome Data Viewer
Location:
chromosome: II
Exon count:
4
Sequence:
Chromosome: II; NC_003280.10 (12423608..12425690, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Serpentine receptor class epsilon-26 Neighboring gene pseudo Neighboring gene hypothetical protein Neighboring gene DAF-16/FOXO Controlled, germline Tumor affecting

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

  • Homologs of the daf-22 gene: The daf-22 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, M.oryzae, N.crassa, and frog.
  • Orthologs

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
catalytic activity IEA
Inferred from Electronic Annotation
more info
 
lipid binding IEA
Inferred from Electronic Annotation
more info
 
propanoyl-CoA C-acyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
propanoyl-CoA C-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity, transferring acyl groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acyl-CoA metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
ascaroside biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
dauer entry IMP
Inferred from Mutant Phenotype
more info
PubMed 
dauer exit IMP
Inferred from Mutant Phenotype
more info
PubMed 
lipid transport IEA
Inferred from Electronic Annotation
more info
 
negative regulation of lipid storage IMP
Inferred from Mutant Phenotype
more info
PubMed 
olfactory learning IMP
Inferred from Mutant Phenotype
more info
PubMed 
pheromone biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of developmental growth IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of intracellular cholesterol transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
positive regulation of nematode larval development IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of chemotaxis IMP
Inferred from Mutant Phenotype
more info
PubMed 
response to pheromone IMP
Inferred from Mutant Phenotype
more info
PubMed 
very long-chain fatty acid metabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
peroxisome IDA
Inferred from Direct Assay
more info
PubMed 
peroxisome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Non-specific lipid-transfer protein-like 2
NP_496639.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    12423608..12425690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_064238.3NP_496639.1  Non-specific lipid-transfer protein-like 2 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496639.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    G5EDP2
    Conserved Domains (2) summary
    PRK08256
    Location:7388
    PRK08256; lipid-transfer protein; Provisional
    cd00829
    Location:11388
    SCP-x_thiolase; Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal ...
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