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C05C10.3 Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial [ Caenorhabditis elegans ]

Gene ID: 174548, updated on 19-Nov-2016
Gene symbol
C05C10.3
Gene description
Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial
Primary source
WormBase:WBGene00007330
Locus tag
CELE_C05C10.3
Gene type
protein coding
RNA name
Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
See C05C10.3 in Map Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (9934547..9936888, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Uncharacterized ATP-dependent helicase C05C10.2 Neighboring gene Putative acid phosphatase 11 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
3-oxoacid CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
 
CoA-transferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
ketone body catabolic process IEA
Inferred from Electronic Annotation
more info
 
metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion IEA
Inferred from Electronic Annotation
more info
 
Names
Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial
NP_496144.1
  • Confirmed by transcript evidence

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    9934547..9936888 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063743.5NP_496144.1  Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_496144.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q09450
    Conserved Domains (3) summary
    COG1788
    Location:37273
    AtoD; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid transport and metabolism]
    COG4670
    Location:35516
    YdiF; Acyl CoA:acetate/3-ketoacid CoA transferase [Lipid transport and metabolism]
    cl00339
    Location:299506
    SugarP_isomerase; SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ...
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