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cam-1 Tyrosine-protein kinase receptor cam-1 [ Caenorhabditis elegans ]

Gene ID: 174473, updated on 4-Jun-2017
Gene symbol
cam-1
Gene description
Tyrosine-protein kinase receptor cam-1
Primary source
WormBase:WBGene00000289
Locus tag
CELE_C01G6.8
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
See cam-1 in Map Viewer
Location:
chromosome: II
Exon count:
9
Sequence:
Chromosome: II; NC_003280.10 (9296409..9310301, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene fatty Acid CoA Synthetase family Neighboring gene hypothetical protein Neighboring gene ncRNA Neighboring gene Cockayne Syndrome complementation group A homolog Neighboring gene WD repeat and FYVE domain-containing protein 2

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
Wnt-protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
frizzled binding IPI
Inferred from Physical Interaction
more info
PubMed 
kinase activity IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
transmembrane receptor protein tyrosine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
transmembrane receptor protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 
axon guidance IEA
Inferred from Electronic Annotation
more info
PubMed 
axon guidance IMP
Inferred from Mutant Phenotype
more info
PubMed 
cell migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
establishment of neuroblast polarity IMP
Inferred from Mutant Phenotype
more info
PubMed 
hermaphrodite genitalia development IEA
Inferred from Electronic Annotation
more info
PubMed 
interneuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
locomotion IEA
Inferred from Electronic Annotation
more info
PubMed 
motor neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
nervous system development IEA
Inferred from Electronic Annotation
more info
 
neuroblast migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
neuron migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
peptidyl-tyrosine phosphorylation IDA
Inferred from Direct Assay
more info
PubMed 
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
sensory neuron migration IGI
Inferred from Genetic Interaction
more info
PubMed 
sensory neuron migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
transmembrane receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
axon IDA
Inferred from Direct Assay
more info
PubMed 
axon IEA
Inferred from Electronic Annotation
more info
 
cell junction IEA
Inferred from Electronic Annotation
more info
 
cell projection IDA
Inferred from Direct Assay
more info
PubMed 
cell projection IEA
Inferred from Electronic Annotation
more info
 
dendrite IDA
Inferred from Direct Assay
more info
PubMed 
dendrite IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
neuromuscular junction IDA
Inferred from Direct Assay
more info
PubMed 
neuron projection IDA
Inferred from Direct Assay
more info
PubMed 
neuronal cell body membrane IDA
Inferred from Direct Assay
more info
PubMed 
perikaryon IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
synapse IEA
Inferred from Electronic Annotation
more info
 
Names
Tyrosine-protein kinase receptor cam-1
NP_001021907.1
  • Confirmed by transcript evidence
NP_001021908.1
  • Partially confirmed by transcript evidence
NP_001033327.1
  • Confirmed by transcript evidence

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    9296409..9310301 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001026736.4NP_001021907.1  Tyrosine-protein kinase receptor cam-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021907.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    G5EGK5
    Conserved Domains (6) summary
    cd00096
    Location:55122
    Ig; Immunoglobulin domain
    cd07459
    Location:203335
    CRD_TK_ROR_like; Cysteine-rich domain of tyrosine kinase-like orphan receptors
    smart00130
    Location:352431
    KR; Kringle domain
    smart00221
    Location:590857
    STYKc; Protein kinase; unclassified specificity
    pfam07679
    Location:39127
    I-set; Immunoglobulin I-set domain
    cd00192
    Location:594858
    PTKc; Catalytic domain of Protein Tyrosine Kinases
  2. NM_001026737.3NP_001021908.1  Tyrosine-protein kinase receptor cam-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021908.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    G5EGK5
    Conserved Domains (6) summary
    cd00096
    Location:2996
    Ig; Immunoglobulin domain
    cd07459
    Location:177309
    CRD_TK_ROR_like; Cysteine-rich domain of tyrosine kinase-like orphan receptors
    smart00130
    Location:326405
    KR; Kringle domain
    smart00221
    Location:564831
    STYKc; Protein kinase; unclassified specificity
    pfam07679
    Location:13101
    I-set; Immunoglobulin I-set domain
    cd00192
    Location:568832
    PTKc; Catalytic domain of Protein Tyrosine Kinases
  3. NM_001038238.2NP_001033327.1  Tyrosine-protein kinase receptor cam-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001033327.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    G5EGK5
    Conserved Domains (4) summary
    cd07459
    Location:44176
    CRD_TK_ROR_like; Cysteine-rich domain of tyrosine kinase-like orphan receptors
    smart00130
    Location:193272
    KR; Kringle domain
    smart00221
    Location:431698
    STYKc; Protein kinase; unclassified specificity
    cd00192
    Location:435699
    PTKc; Catalytic domain of Protein Tyrosine Kinases
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