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T13H5.1 Tyrosine-protein phosphatase [ Caenorhabditis elegans ]

Gene ID: 174359, updated on 6-Sep-2019

Summary

Gene symbol
T13H5.1
Gene description
Tyrosine-protein phosphatase
Primary source
WormBase:WBGene00011755
Locus tag
CELE_T13H5.1
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See T13H5.1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
28
Sequence:
Chromosome: II; NC_003280.10 (8487513..8509055, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene HIG1 domain-containing protein Neighboring gene hypothetical protein Neighboring gene Gamma Butyrobetaine Hydroxylase Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene CRAL/TRIO and GOLD domain containing Neighboring gene Ribonuclease H2 subunit A

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
phosphoprotein phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
protein tyrosine phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
peptidyl-tyrosine dephosphorylation IEA
Inferred from Electronic Annotation
more info
 
protein dephosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Tyrosine-protein phosphatase
NP_001022346.2
  • Confirmed by transcript evidence
NP_001022347.1
  • Partially confirmed by transcript evidence
NP_001122640.1
  • Partially confirmed by transcript evidence
NP_001129824.1
  • Partially confirmed by transcript evidence
NP_001129825.1
  • Partially confirmed by transcript evidence
NP_001254153.1
  • Partially confirmed by transcript evidence
NP_001254154.1
  • Partially confirmed by transcript evidence
NP_001254155.1
  • Partially confirmed by transcript evidence
NP_001359726.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    8487513..8509055 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001136352.3NP_001129824.1  Tyrosine-protein phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001129824.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EGJ3
    Conserved Domains (2) summary
    smart00194
    Location:93352
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:120352
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
  2. NM_001027175.3NP_001022346.2  Tyrosine-protein phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001022346.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EGI0
    Conserved Domains (2) summary
    smart00194
    Location:206465
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:233465
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
  3. NM_001129168.2NP_001122640.1  Tyrosine-protein phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001122640.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EC69
    Conserved Domains (3) summary
    smart00194
    Location:206465
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:233465
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    cl21483
    Location:528796
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
  4. NM_001373769.1NP_001359726.1  Tyrosine-protein phosphatase [Caenorhabditis elegans]

    Status: REVIEWED

  5. NM_001267225.2NP_001254154.1  Tyrosine-protein phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001254154.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5ECI6
    Conserved Domains (2) summary
    smart00194
    Location:162421
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:189421
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
  6. NM_001267226.2NP_001254155.1  Tyrosine-protein phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001254155.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EG42
    Conserved Domains (2) summary
    smart00194
    Location:57316
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:84316
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
  7. NM_001027176.4NP_001022347.1  Tyrosine-protein phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001022347.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EFE8
    Conserved Domains (2) summary
    smart00194
    Location:114373
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:141373
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
  8. NM_001136353.2NP_001129825.1  Tyrosine-protein phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001129825.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G5EGM6
    Conserved Domains (2) summary
    smart00194
    Location:66325
    PTPc; Protein tyrosine phosphatase, catalytic domain
    cd00047
    Location:93325
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
  9. NM_001267224.2NP_001254153.1  Tyrosine-protein phosphatase [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001254153.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F5GU90
    Conserved Domains (1) summary
    cl21483
    Location:25127
    PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
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