Format

Send to:

Choose Destination

aqp-1 AQuaPorin or aquaglyceroporin related [ Caenorhabditis elegans ]

Gene ID: 174190, updated on 12-Feb-2021

Summary

Gene symbol
aqp-1
Gene description
AQuaPorin or aquaglyceroporin related
Primary source
WormBase:WBGene00000169
Locus tag
CELE_F32A5.5
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See aqp-1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
6
Sequence:
Chromosome: II; NC_003280.10 (7235828..7238349, complement)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Chloride channel protein;Chloride channel protein clh-3 Neighboring gene Uncharacterized protein Neighboring gene Serine carboxypeptidase ctsa-3.1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ShKT domain-containing protein Neighboring gene putative peroxisomal membrane protein PEX13

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
channel activity IDA
Inferred from Direct Assay
more info
PubMed 
channel activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
defense response to Gram-negative bacterium IGI
Inferred from Genetic Interaction
more info
PubMed 
defense response to Gram-negative bacterium IMP
Inferred from Mutant Phenotype
more info
PubMed 
glycerol transport IDA
Inferred from Direct Assay
more info
PubMed 
innate immune response IGI
Inferred from Genetic Interaction
more info
PubMed 
innate immune response IMP
Inferred from Mutant Phenotype
more info
PubMed 
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
basolateral plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
AQuaPorin or aquaglyceroporin related
NP_001367603.1
  • Product from WormBase gene class aqp;
    Confirmed by transcript evidence
NP_495510.1
  • Product from WormBase gene class aqp;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    7235828..7238349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_063109.6NP_495510.1  AQuaPorin or aquaglyceroporin related [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495510.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q19949
    Conserved Domains (1) summary
    cd00333
    Location:33272
    MIP; Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal ...
  2. NM_001381493.2NP_001367603.1  AQuaPorin or aquaglyceroporin related [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (1) summary
    cd00333
    Location:24263
    MIP; Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal ...
Support Center