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vps-35 Vacuolar protein sorting-associated protein 35 [ Caenorhabditis elegans ]

Gene ID: 174000, updated on 6-Aug-2017
Gene symbol
vps-35
Gene description
Vacuolar protein sorting-associated protein 35
Primary source
WormBase:WBGene00006933
Locus tag
CELE_F59G1.3
Gene type
protein coding
RNA name
Vacuolar protein sorting-associated protein 35
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
See vps-35 in Map Viewer
Location:
chromosome: II
Exon count:
8
Sequence:
Chromosome: II; NC_003280.10 (5907820..5910708)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene TetraSPanin family Neighboring gene hypothetical protein Neighboring gene ncRNA Neighboring gene ncRNA

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
protein transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
protein transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
embryo development ending in birth or egg hatching IEA
Inferred from Electronic Annotation
more info
PubMed 
intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
locomotion IEA
Inferred from Electronic Annotation
more info
PubMed 
positive regulation of multicellular organism growth IEA
Inferred from Electronic Annotation
more info
PubMed 
protein localization to postsynaptic membrane IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein transport IEA
Inferred from Electronic Annotation
more info
 
receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
PubMed 
regulation of presynapse assembly IGI
Inferred from Genetic Interaction
more info
PubMed 
reproduction IEA
Inferred from Electronic Annotation
more info
PubMed 
retrograde transport, endosome to Golgi IBA
Inferred from Biological aspect of Ancestor
more info
 
retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytosol IEA
Inferred from Electronic Annotation
more info
 
dendrite IMP
Inferred from Mutant Phenotype
more info
PubMed 
late endosome IBA
Inferred from Biological aspect of Ancestor
more info
 
neuronal cell body IMP
Inferred from Mutant Phenotype
more info
PubMed 
retromer complex IBA
Inferred from Biological aspect of Ancestor
more info
 
retromer complex IEA
Inferred from Electronic Annotation
more info
 
Names
Vacuolar protein sorting-associated protein 35
NP_495180.2
  • Confirmed by transcript evidence

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    5907820..5910708
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062779.4NP_495180.2  Vacuolar protein sorting-associated protein 35 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_495180.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q21053
    Conserved Domains (1) summary
    pfam03635
    Location:14771
    Vps35; Vacuolar protein sorting-associated protein 35
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