Format

Send to:

Choose Destination

hlh-1 Myoblast determination protein 1 homolog [ Caenorhabditis elegans ]

Gene ID: 173788, updated on 19-Oct-2019

Summary

Gene symbol
hlh-1
Gene description
Myoblast determination protein 1 homolog
Primary source
WormBase:WBGene00001948
Locus tag
CELE_B0304.1
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See hlh-1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
7
Sequence:
Chromosome: II; NC_003280.10 (4518560..4522523)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene CAMTA (CAlModulin-binding Transcriptional activator) Neighboring gene ncRNA Neighboring gene CYtochrome P450 family Neighboring gene ncRNA Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Serpentine Receptor, class A (alpha)

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
cell differentiation IEA
Inferred from Electronic Annotation
more info
 
multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
muscle organ development IEA
Inferred from Electronic Annotation
more info
 
positive regulation of mesodermal cell fate specification IGI
Inferred from Genetic Interaction
more info
PubMed 
positive regulation of myoblast differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
positive regulation of myoblast fusion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
striated muscle cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Myoblast determination protein 1 homolog
NP_001021892.1
  • Confirmed by transcript evidence
NP_001021893.1
  • Confirmed by transcript evidence
NP_494798.4
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    4518560..4522523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062397.5NP_494798.4  Myoblast determination protein 1 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_494798.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P22980
    Conserved Domains (1) summary
    cd00083
    Location:151207
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
  2. NM_001026722.3NP_001021893.1  Myoblast determination protein 1 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021893.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P22980
    Conserved Domains (1) summary
    cd00083
    Location:153211
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
  3. NM_001026721.2NP_001021892.1  Myoblast determination protein 1 homolog [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021892.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P22980
    Conserved Domains (1) summary
    cd00083
    Location:153211
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
Support Center