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eya-1 Eyes absent homolog 1 [ Caenorhabditis elegans ]

Gene ID: 173293, updated on 10-Aug-2021

Summary

Gene symbol
eya-1
Gene description
Eyes absent homolog 1
Primary source
WormBase:WBGene00001377
Locus tag
CELE_C49A1.4
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

See eya-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
10
Sequence:
Chromosome: I; NC_003279.8 (14220693..14231360, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Bestrophin homolog Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene CW domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Glycosyltransferase family 92 protein

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables phosphoprotein phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein tyrosine phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein tyrosine phosphatase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables transcription coactivator activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in embryonic morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in histone dephosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in locomotion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mesodermal cell fate specification IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in nematode larval development IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in nematode larval development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in oviposition IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in peptidyl-tyrosine dephosphorylation IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of DNA repair IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in positive regulation of apoptotic process involved in development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of cellular response to heat IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of response to oxidative stress IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of transcription, DNA-templated IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in tissue morphogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in tissue morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Eyes absent homolog 1
NP_001021055.1
  • Confirmed by transcript evidence
NP_001367120.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    14220693..14231360 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001025884.6NP_001021055.1  Eyes absent homolog 1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001021055.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    O17670
    Conserved Domains (1) summary
    cd02601
    Location:230503
    HAD_Eya; protein tyrosine phosphatase domain of the nuclear transcription factor of Eyes absent (Eya) and related phosphatase domains
  2. NM_001381258.2NP_001367120.1  Eyes absent homolog 1 [Caenorhabditis elegans]

    Status: REVIEWED

    Conserved Domains (1) summary
    cd02601
    Location:196469
    HAD_Eya; protein tyrosine phosphatase domain of the nuclear transcription factor of Eyes absent (Eya) and related phosphatase domains
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