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unc-101 AP-1 complex subunit mu-1-I [ Caenorhabditis elegans ]

Gene ID: 173121, updated on 19-Aug-2018

Summary

Gene symbol
unc-101
Gene description
AP-1 complex subunit mu-1-I
Primary source
WormBase:WBGene00006829
Locus tag
CELE_K11D2.3
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See unc-101 in Genome Data Viewer
Location:
chromosome: I
Exon count:
7
Sequence:
Chromosome: I; NC_003279.8 (12508555..12512901)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Acid ceramidase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Immune System, organism-specific biosystem (from REACTOME)
    Immune System, organism-specific biosystemcomputationally inferred pathway (not manually curated)
  • Innate Immune System, organism-specific biosystem (from REACTOME)
    Innate Immune System, organism-specific biosystemcomputationally inferred pathway (not manually curated)
  • Lysosome, organism-specific biosystem (from KEGG)
    Lysosome, organism-specific biosystemLysosomes are membrane-delimited organelles in animal cells serving as the cell's main digestive compartment to which all sorts of macromolecules are delivered for degradation. They contain more than...
  • Lysosome, conserved biosystem (from KEGG)
    Lysosome, conserved biosystemLysosomes are membrane-delimited organelles in animal cells serving as the cell's main digestive compartment to which all sorts of macromolecules are delivered for degradation. They contain more than...
  • Male mating, organism-specific biosystem (from WikiPathways)
    Male mating, organism-specific biosystemCaenorhabditis elegans males exhibit sterotypic and invariant mating behavior starting the moment the animal senses a hermaphrodite and ending with insemination. This complex behavior has been broke...
  • Neutrophil degranulation, organism-specific biosystem (from REACTOME)
    Neutrophil degranulation, organism-specific biosystemcomputationally inferred pathway (not manually curated)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
apical protein localization IGI
Inferred from Genetic Interaction
more info
PubMed 
cilium assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
embryo development ending in birth or egg hatching IGI
Inferred from Genetic Interaction
more info
PubMed 
intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 
intracellular protein transport NAS
Non-traceable Author Statement
more info
PubMed 
nematode larval development IGI
Inferred from Genetic Interaction
more info
PubMed 
protein transport IEA
Inferred from Electronic Annotation
more info
 
receptor localization to non-motile cilium IMP
Inferred from Mutant Phenotype
more info
PubMed 
vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 
vulval development NAS
Non-traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
AP-1 adaptor complex NAS
Non-traceable Author Statement
more info
PubMed 
Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
cell projection IEA
Inferred from Electronic Annotation
more info
 
clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
 
clathrin-coated vesicle membrane IEA
Inferred from Electronic Annotation
more info
 
cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
dendrite IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
AP-1 complex subunit mu-1-I
NP_001040675.1
  • Confirmed by transcript evidence
NP_001040676.1
  • Confirmed by transcript evidence
NP_001251914.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    12508555..12512901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001047210.2NP_001040675.1  AP-1 complex subunit mu-1-I [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040675.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P35602
    Conserved Domains (2) summary
    cl02092
    Location:5126
    Clat_adaptor_s; Clathrin adaptor complex small chain
    cd09258
    Location:152421
    AP-1_Mu1A_Cterm; C-terminal domain of medium Mu1A subunit in ubiquitously expressed clathrin-associated adaptor protein (AP) complex AP-1
  2. NM_001264985.1NP_001251914.1  AP-1 complex subunit mu-1-I [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001251914.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    D7SFR1
    Conserved Domains (1) summary
    cd09258
    Location:3272
    AP-1_Mu1A_Cterm; C-terminal domain of medium Mu1A subunit in ubiquitously expressed clathrin-associated adaptor protein (AP) complex AP-1
  3. NM_001047211.1NP_001040676.1  AP-1 complex subunit mu-1-I [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001040676.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P35602
    Conserved Domains (1) summary
    cl10970
    Location:157
    AP_MHD_Cterm; C-terminal domain of adaptor protein (AP) complexes medium mu subunits and its homologs (MHD)
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