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cox-5B Cytochrome OXidase assembly protein [ Caenorhabditis elegans ]

Gene ID: 172832, updated on 9-Sep-2018

Summary

Gene symbol
cox-5B
Gene description
Cytochrome OXidase assembly protein
Primary source
WormBase:WBGene00000371
Locus tag
CELE_F26E4.9
Gene type
protein coding
RNA name
Cytochrome OXidase assembly protein
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See cox-5B in Genome Data Viewer
Location:
chromosome: I
Exon count:
3
Sequence:
Chromosome: I; NC_003279.8 (9789009..9789763)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Ribonuclease 3 Neighboring gene ncRNA Neighboring gene Tubulin alpha chain Neighboring gene ncRNA Neighboring gene E3 ubiquitin-protein ligase hrd-like protein 1 Neighboring gene ncRNA

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
contributes_to cytochrome-c oxidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytochrome-c oxidase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
determination of adult lifespan IMP
Inferred from Mutant Phenotype
more info
PubMed 
lipid storage IMP
Inferred from Mutant Phenotype
more info
PubMed 
mitochondrial ATP synthesis coupled proton transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrial ATP synthesis coupled proton transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
mitochondrial electron transport, cytochrome c to oxygen IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 
mitochondrial respiratory chain complex IV IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
Cytochrome OXidase assembly protein
NP_492601.1
  • Product from WormBase gene class cox;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    9789009..9789763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_060200.3NP_492601.1  Cytochrome OXidase assembly protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492601.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    P90849
    Conserved Domains (1) summary
    cd00924
    Location:36130
    Cyt_c_Oxidase_Vb; Cytochrome c oxidase subunit Vb. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of ...
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