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lmn-1 Lamin-1 [ Caenorhabditis elegans ]

Gene ID: 172687, updated on 10-Oct-2019

Summary

Gene symbol
lmn-1
Gene description
Lamin-1
Primary source
WormBase:WBGene00003052
Locus tag
CELE_DY3.2
Gene type
protein coding
RNA name
Lamin-1
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See lmn-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
6
Sequence:
Chromosome: I; NC_003279.8 (8763041..8765631)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Mitochondrial import inner membrane translocase subunit tim-13 Neighboring gene BHLH domain-containing protein Neighboring gene Telomerase reverse transcriptase

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
histone binding IDA
Inferred from Direct Assay
more info
PubMed 
identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
structural molecule activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
determination of adult lifespan IGI
Inferred from Genetic Interaction
more info
PubMed 
determination of adult lifespan IMP
Inferred from Mutant Phenotype
more info
PubMed 
embryo development ending in birth or egg hatching IMP
Inferred from Mutant Phenotype
more info
PubMed 
germ cell development IMP
Inferred from Mutant Phenotype
more info
PubMed 
nuclear migration along microtubule IMP
Inferred from Mutant Phenotype
more info
PubMed 
nuclear pore distribution IMP
Inferred from Mutant Phenotype
more info
PubMed 
nucleus organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of cell proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein localization IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of chromosome segregation IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of mitotic cell cycle IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
intermediate filament IEA
Inferred from Electronic Annotation
more info
 
lamin filament ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
nuclear envelope IDA
Inferred from Direct Assay
more info
PubMed 
nuclear envelope IEA
Inferred from Electronic Annotation
more info
 
nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 
nuclear periphery IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Lamin-1
NP_492371.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    8763041..8765631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059970.5NP_492371.1  Lamin-1 [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492371.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q21443
    Conserved Domains (3) summary
    pfam00038
    Location:44386
    Filament; Intermediate filament protein
    pfam00932
    Location:443547
    LTD; Lamin Tail Domain
    cl19511
    Location:57147
    DUF2317; Uncharacterized protein conserved in bacteria (DUF2317)
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