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cyc-1 CYtochrome C [ Caenorhabditis elegans ]

Gene ID: 172582, updated on 5-Aug-2018

Summary

Gene symbol
cyc-1
Gene description
CYtochrome C
Primary source
WormBase:WBGene00000869
Locus tag
CELE_C54G4.8
Gene type
protein coding
RNA name
CYtochrome C
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See cyc-1 in Genome Data Viewer
Location:
chromosome: I
Exon count:
6
Sequence:
Chromosome: I; NC_003279.8 (8023252..8024403, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Putative ribosomal protein S6 kinase alpha-2;Ribosomal protein S6 kinase Neighboring gene Downstream Of DAF-16 (regulated by DAF-16) Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Eukaryotic translation initiation factor 2 subunit 2

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
electron transfer activity IEA
Inferred from Electronic Annotation
more info
 
electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
heme binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
determination of adult lifespan IMP
Inferred from Mutant Phenotype
more info
PubMed 
mitochondrial ATP synthesis coupled proton transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitochondrial ATP synthesis coupled proton transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
mitochondrial electron transport, ubiquinol to cytochrome c IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
mitochondrial respiratory chain complex III IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
CYtochrome C
NP_492207.1
  • Product from WormBase gene class cyc;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    8023252..8024403 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_059806.3NP_492207.1  CYtochrome C [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_492207.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q18853
    Conserved Domains (2) summary
    COG2857
    Location:48264
    CYT1; Cytochrome c1 [Energy production and conversion]
    pfam02167
    Location:49264
    Cytochrom_C1; Cytochrome C1 family
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