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zipt-2.4 Zrt (ZRT), Irt-(IRT-) like Protein Transporter [ Caenorhabditis elegans ]

Gene ID: 172230, updated on 22-Jan-2020

Summary

Gene symbol
zipt-2.4
Gene description
Zrt (ZRT), Irt-(IRT-) like Protein Transporter
Primary source
WormBase:WBGene00018897
Locus tag
CELE_F55F8.9
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See zipt-2.4 in Genome Data Viewer
Location:
chromosome: I
Exon count:
10
Sequence:
Chromosome: I; NC_003279.8 (5669946..5673352, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Protein-tyrosine-phosphatase Neighboring gene SSD domain-containing protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Mitochondrial import inner membrane translocase subunit TIM14

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
metal ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
zinc ion transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
metal ion transport IEA
Inferred from Electronic Annotation
more info
 
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
zinc ion transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
Zrt (ZRT), Irt-(IRT-) like Protein Transporter
NP_001249971.1
  • Product from WormBase gene class zipt;
    Confirmed by transcript evidence
NP_001249972.1
  • Product from WormBase gene class zipt;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    5669946..5673352 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001263043.2NP_001249972.1  Zrt (ZRT), Irt-(IRT-) like Protein Transporter [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001249972.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    P91348
    Conserved Domains (1) summary
    pfam02535
    Location:4438
    Zip; ZIP Zinc transporter
  2. NM_001263042.2NP_001249971.1  Zrt (ZRT), Irt-(IRT-) like Protein Transporter [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001249971.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    G4SKK4
    Conserved Domains (1) summary
    pfam02535
    Location:4402
    Zip; ZIP Zinc transporter
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