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aat-5 Amino Acid Transporter [ Caenorhabditis elegans ]

Gene ID: 171814, updated on 19-Aug-2018

Summary

Gene symbol
aat-5
Gene description
Amino Acid Transporter
Primary source
WormBase:WBGene00000006
Locus tag
CELE_C55C2.5
Gene type
protein coding
RNA name
Amino Acid Transporter
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

Genomic context

See aat-5 in Genome Data Viewer
Location:
chromosome: I
Exon count:
10
Sequence:
Chromosome: I; NC_003279.8 (2571988..2576006, complement)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Sperm-specific class P protein 19 Neighboring gene SCRaTch (zinc finger transcriptional repressor) homolog Neighboring gene Fructose-1,6-BiPhosphatase Neighboring gene PaTched Related family

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
L-amino acid transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
L-alpha-amino acid transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
amino acid transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Amino Acid Transporter
NP_491002.2
  • Product from WormBase gene class aat;
    Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    2571988..2576006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_058601.4NP_491002.2  Amino Acid Transporter [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_491002.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2KZG9
    Conserved Domains (1) summary
    TIGR00911
    Location:6462
    2A0308; L-type amino acid transporter

RNA

  1. NR_131358.1 RNA Sequence

    Status: REVIEWED

  2. NR_131780.1 RNA Sequence

    Status: REVIEWED

  3. NR_131359.1 RNA Sequence

    Status: REVIEWED

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